Ll_transcript_415278

• Id Trinity: TRINITY_DN49682_c4_g1_i2
• Name Transcript: Ll_transcript_415278
• Sequence: CATAAATTAGAATCATATTTGGGTTTCATTTTTATATTGGCTTAATTTAATTATCGAAAAATTCTAAGGTCAATAATCTATGGATATCGATAAAATTTTG GGTACTACCAAACCTGCAAGTTTTCCAAGGAAGAGTGCTATTTATGTGTGGGGATACAATCAATCTGGTCAGACAGGGAGAAAGGGGAAACAGGATCAGC TGAGGATTCCGAAGCAGCTGCCTCCTGAGCTGTTTGGATGTCCAGCTGGTTTTAATGCACGGTGGTTGGATGTTGCTTGTGGTCGTGAGCATACCGCAGC AATTGCTTCCGATGGCTCACTTTTTACATGGGGGGCTAATGACTATGGTCAATTGGGTGATGGAACTGAGGAGCGAAGGAAACATCCGAAGAAAGTAAAA CAACTAGGGTCGGAGTTTGTAAAATCTGTGTCCTGTGGAGCACATTGTTCTGCTTGCATTGCAGAACCTCGTGACAATGATGGTACTGTATCTACTGGGA GGCTCTGGGTTTGGGGACAAAATCAGGGATCAAATTTTCCTAGATTGTTCTGGGGGGCCTTCGAACCTAACACGGTTATTCATCAAGTGTCATGTGGAGC TGCCCATGTGGTTGCTTTGTCTGAGGCGGGCCTTCTACAAGCTTGGGGATACAATGAGTGTGGCCAACTTGGCCGAGGTGTTACTTGTGAAGGACTTCAG GGGGCTCGTATTTTAAGTTCTTATGCTAAGTTCCTTGATGAAGCCCCCGAGCTTGTGAAGATTACCAAAGTGTCATGTGGGGAATACCACACAGCAGCCA TTTCTGATAAGGGCGAGGTGTAAGTAATTTGAAGGACATTCTAGTTGGAGATAATCAGATAATTATAATTTTAAGCTTGAGAATTGTGGTTTTCCGCATG ACATTAGGGAATCTGACACCAGGAGACAATATGCAATGGAAATCCTGCATCTATTATGCAAGTTTCTATTCCCTTGGCTTGGTTATACAATAAAAAAACT ATAGTTGACTGTAGTTATATATTCCTAGAGCCAACAGGGTTATCTTCTAAGTTAAGTAACCGTAATATTATCTAGATTTTGTTTGAAAAAGTTTGCAACA AGATTTTTTATTCTGTTGATAATTTGACATCCACATATGATTTATTGGTAAGTATTTATTTATTATTTTTCATTATAGAATGTTTGTTATGGTGTAAGAT AGTAGTTGCTGAAAACTGGGAGCTTAAAATATGTATGGTAACATTGCATCAGAAATAGGCATATGTTGTTTACGGTGGTTTCCACTCACCAAATTTGCTA TTTTGTGTTTGTGATTTTTAATGAAAAAAGAATATGCACATATTATAGAGTGGATGACATCTTTTATTCTTATTGTTGAGACATGTAGACCTCAAGTTAC TTCTTTTCGTTTACCGAGGAATTATTTATTCCAGTTATATGTTAGGGATCCATAAGAATTAATAAATCATGACTACTTATGGTATTTAGCTTGTTGTGAT AATATTTCCTCACTTATTATATTTTCCGTTGGACCAGTTACACATGGGGGCTCGGAAATATGGGTCAACTTGGCCATTCTTCACTCCAGTATGGGGATAA GGAGCTTCTCCCGAGGAGGGTGGTTTCCCTTGATGGTATTGTCATAAAAGATGTGGCATGTGGTGGTGTACATACTTGTGCTCTGAGTAAAGAAGGAGCA CTTTATGCTTGTGGCGGTGGTCAATCTGGTCAGTTAGGCCTTGGCCCCCAAACTGGATTGTTCTCTTGTGTAGCTAATGATTCTCAGACATTTTTCCGAA ACATTCCCATTTTAATTGTTCCAAAAGATGTGCAATTTGTTGCATGTGGACATTCCCATACTCTTATTTCTACGAAGGAAGGTCGAATTCATGGGTGGGG TTATAATAATTACGGCCAAGCAGCCAATGAGAAATGTACATATGCCTGGTATCCATCACCTGTTGACTGGTGCGTTGGGGAGATCCGAAAACTAGCTGCT GGTGGGGGCCATTCGGCTGTGTTGACCGATGCTTGTTCATTAAAGGAGCTGTGTGAGTTTGTTCTCGCAGATTGTATGACCTTATCAAATGCTGCTAAGG TCGAGGATATTGCTTCTAGAACTGGATCGGATGCTTTAGCACGCCTTTGCGGAAGACTCAGAGAGTATTTGCTTATTAATGGTGGTGATGATGAAGAGAA CGTGGTCAGTAAAATCTGACAATATATGAAGTTAGTATTAATCACAATTTATTGTTGTAATGTAAATCTGTGTATTCAGAAGTTGTAACTATGTTATTAT TCTGTAACTAGTATCAATTGAATAAGGATTTGTACTTGACTATGTATAGACCATGAATATGCCAATATTGAATTTCAAACTTCTTTCTTTCTCTTTTTAT TTCGGGAATAAAGTATCTATCGGTATAAGGAGATATGTTATCTTCTCCTACTAGTGAAAT
• Tissue: pods
• Gene name: LI_gene_171350;
• Additional information: details;

Expression of Ll_transcript_415278

FPKM

• PAB: 2.3
• PNAB: 0.4
• PS1: 0.4
• PS2: 0.2
• PS3: 0.3
• PW1: 1.1
• PW2: 0.4
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_415278

• Blastp: RCC1 and BTB domain-containing protein 1 from Mus with 29.66% of identity
• Blastx: RCC1 and BTB domain-containing protein 1 from Mus with 29.66% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (71330)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456545.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF00415.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;