Ll_transcript_415280

Id TrinityTRINITY_DN49682_c4_g1_i4
Name TranscriptLl_transcript_415280
SequenceGTTTATTTGTATTACTTTTATTTAAGAGTCAATGATGATTGGAAATGAATAATGGATGATGCAGTGACAGTGTAAAAAACTCTTACATTGTCAGTGCATA CATATTTTTCTCTTAGCTTTTTGGAGGGCTGTACTATTCTGACAGAGGAGCTCTAGCAGGAAGTGATTAGGAAACAAAAGTTCTAACAGTCTAACACTCA TGTATATATTCCATATCCCAGGGGCTAATGACTATGGTCAATTGGGTGATGGAACTGAGGAGCGAAGGAAACATCCGAAGAAAGTAAAACAACTAGGGTC GGAGTTTGTAAAATCTGTGTCCTGTGGAGCACATTGTTCTGCTTGCATTGCAGAACCTCGTGACAATGATGGTACTGTATCTACTGGGAGGCTCTGGGTT TGGGGACAAAATCAGGGATCAAATTTTCCTAGATTGTTCTGGGGGGCCTTCGAACCTAACACGGTTATTCATCAAGTGTCATGTGGAGCTGCCCATGTGG TTGCTTTGTCTGAGGCGGGCCTTCTACAAGCTTGGGGCGAGTCACTAATTGCTTCTCTTTATTTTCTTTCCAATGTTTTGTAACATCAATGATTCATGAT TGCCTTTTACGGAGTTGACATGGTTAAAGACCTTTAAATTTACAGAGCATTGAATGCAGTGAAGTAAACTTGAGCATTCACAAAGTAGGTTTCTTGCCAC CTACTAATCGGACTTTTCTCACTGTTTCCATAAACCAGGATACAATGAGTGTGGCCAACTTGGCCGAGGTGTTACTTGTGAAGGACTTCAGGGGGCTCGT ATTTTAAGTTCTTATGCTAAGTTCCTTGATGAAGCCCCCGAGCTTGTGAAGATTACCAAAGTGTCATGTGGGGAATACCACACAGCAGCCATTTCTGATA AGGGCGAGGTGTAAGTAATTTGAAGGACATTCTAGTTGGAGATAATCAGATAATTATAATTTTAAGCTTGAGAATTGTGGTTTTCCGCATGACATTAGGG AATCTGACACCAGGAGACAATATGCAATGGAAATCCTGCATCTATTATGCAAGTTTCTATTCCCTTGGCTTGGTTATACAATAAAAAAACTATAGTTGAC TGTAGTTATATATTCCTAGAGCCAACAGGGTTATCTTCTAAGTTAAGTAACCGTAATATTATCTAGATTTTGTTTGAAAAAGTTTGCAACAAGATTTTTT ATTCTGTTGATAATTTGACATCCACATATGATTTATTGGTAAGTATTTATTTATTATTTTTCATTATAGAATGTTTGTTATGGTGTAAGATAGTAGTTGC TGAAAACTGGGAGCTTAAAATATGTATGGTAACATTGCATCAGAAATAGGCATATGTTGTTTACGGTGGTTTCCACTCACCAAATTTGCTATTTTGTGTT TGTGATTTTTAATGAAAAAAGAATATGCACATATTATAGAGTGGATGACATCTTTTATTCTTATTGTTGAGACATGTAGACCTCAAGTTACTTCTTTTCG TTTACCGAGGAATTATTTATTCCAGTTATATGTTAGGGATCCATAAGAATTAATAAATCATGACTACTTATGGTATTTAGCTTGTTGTGATAATATTTCC TCACTTATTATATTTTCCGTTGGACCAGTTACACATGGGGGCTCGGAAATATGGGTCAACTTGGCCATTCTTCACTCCAGTATGGGGATAAGGAGCTTCT CCCGAGGAGGGTGGTTTCCCTTGATGGTATTGTCATAAAAGATGTGGCATGTGGTGGTGTACATACTTGTGCTCTGAGTAAAGAAGGAGCACTTTATGCT TGTGGCGGTGGTCAATCTGGTCAGTTAGGCCTTGGCCCCCAAACTGGATTGTTCTCTTGTGTAGCTAATGATTCTCAGACATTTTTCCGAAACATTCCCA TTTTAATTGTTCCAAAAGATGTGCAATTTGTTGCATGTGGACATTCCCATACTCTTATTTCTACGAAGGAAGGTCGAATTCATGGGTGGGGTTATAATAA TTACGGCCAAGCAGCCAATGAGAAATGTACATATGCCTGGTATCCATCACCTGTTGACTGGTGCGTTGGGGAGATCCGAAAACTAGCTGCTGGTGGGGGC CATTCGGCTGTGTTGACCGATGCTTGTTCATTAAAGGAGCTGTGTGAGTTTGTTCTCGCAGATTGTATGACCTTATCAAATGCTGCTAAGGTCGAGGATA TTGCTTCTAGAACTGGATCGGATGCTTTAGCACGCCTTTGCGGAAGACTCAGAGAGTATTTGCTTATTAATGGTGGTGATGATGAAGAGAACGTGGTCAG TAAAATCTGACAATATATGAAGTTAGTATTAATCACAATTTATTGTTGTAATGTAAATCTGTGTATTCAGAAGTTGTAACTATGTTATTATTCTGTAACT AGTATCAATTGAATAAGGATTTGTACTTGACTATGTATAGACCATGAATATGCCAATATTGAATTTCAAACTTCTTTCTTTCTCTTTTTATTTCGGGAAT AAAGTATCTATCGGTATAAGGAGATATGTTATCTTCTCCTACTAGTGAAAT BLAST
Tissuepods
Gene nameLI_gene_171350; 
Additional informationdetails; 

Expression of Ll_transcript_415280

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_415280
BlastpProbable E3 ubiquitin-protein ligase HERC4 from Mus with 38.61% of identity
BlastxProbable E3 ubiquitin-protein ligase HERC4 from Mus with 38.32% of identity
Eggnogubiquitin protein ligase(COG5021)
KeggLink to kegg annotations (67345)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019456541.1)
PfamRegulator of chromosome condensation (RCC1) repeat (PF00415.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;