Ll_transcript_415282

• Id Trinity: TRINITY_DN49682_c4_g1_i6
• Name Transcript: Ll_transcript_415282
• Sequence: TTTGATTTACACTTATAATTTTATCATATTTTATGTATTTTTTACTCTTTTATCATATCTCTGAAGTATCATATCGTATCTTTTAGAGAGATTGCGTGTC AACGTATCAGATACGTATCATATCTGACATTATCCGTATCTGTGCTTCATAGTTATAGATGTCTTGTTTATGCATAATATAATCTTTAGTTGCAGAGTAC AAAATTGTACATTGAATTGAATGGTTTCTTTGCATCCTCATTTAGATTCTAAGGTCAATAATCTATGGACATTGATAAAATTTTGGGCACAACGAAACCT GCAAGTTTTCCAAGGAAAAGTGCCATTTATGTGTGGGGATACAATCAATCTGGTCAGACAGGGAGAAAGGGGAAAGAGGATCAGCTGAGAATTCCGAAAC AGCTGCCTCCTGAACTGTTTGGATGTCCAGCTGGTTTCAATGCAAGGTGGTTGGATGTTGCTTGCGGTCGCGAGCATACAGCAGCAATAGCCTCTGATGG CTCACTTTTTACTTGGGGGGCTAATGACTTTGGTCAATTGGGAGATGGAACTGAGGAGCGAAGGAAACATCCAAAAAAAGTAAAACAACTAGAGTCAGAG TTTGTAAAATCTGTATCATGTGGAGCTCACTGTTCTGCTTGCATTGCAGAACCTCGTGACAATGATAGTACCGTATCGACTGGAAGGCTCTGGGTTTGGG GACAAAATCAGGGATCAAATTTTCCTAGATTGTTCTGGGGTGCCTTTGAACCTAACACAATTATCCATGAAGTGTCTTGTGGAGCTTCCCATGTGGTTGC TTTGTCTGAGGCAGGCCTTCTACAAGCTTGGGGTTACAATGAGTATGGTCAACTTGGCCGAGGCGTTACTTGTGATGGACTGCAGGGGGCTCGTATTATA AGTTCTTATGCGAAGTTTCTTGATGAAGCCCCCGAGCTTGTGAAGATTACCAAAGTGTCATGTGGGGAAAACCACACAGCAGCTGTTTCTGATGAGGGCG AGGTTTACACATGGGGGCTAGGAAATATGGGCCAACTTGGGCATTCTTCACTCCAGTATGGGGATAAAGAGCTACTCCCGAGGAGGGTGGTTTCCCTTGA CGGTATTATCATAAAAGATGTGGCATGTGGTGGTGTACATACTTGTGCTCTGACTAAAGAAGGAGCCCTTTATGCTTGGGGTGGTGGTCAATCTGGTCAG TTAGGCCTTGGCCCCGAAAGTGGATTGTTCTCTTGCGTTGCTAATGACTCTCGGACATTTTTTCGAAACATTCCAGTTTTAACTGTTCCAAAAGATGTCA AATTTGTTGCATGTGGACATTCCCACACTCTTATTTCTATGCAGGATGGCCGGATTCATGGGTGGGGCTACAATAGTTATGGTCAAGCAGCCAACGAGAA ATGTACATATGCCTGGTATCCATCACCGGTTGACTGCTGTGTTGGGGAGATCCGGAAACTAGCTGCTGGTGGGGGCCATTCAGCCGTGTTGACCGATGCT CATTCATTGAAGGAGTTGTGTGAGTTTGTTCTTGCAGATTGTATGACTTCATCCAATGCTGCTAAGATTGAGGATATTGCTTCTACAACTGGATCAGATG CTTTAGCACGCCTTTGCGGAAGAATCAGAGAGTATATGGTTACTGGTGGTGATCATGAACAGAATGAGGTGGACAAAATCTGAGGAAAAATGTGAACAAA GTATTTATCATAATTTATTGTTGTAATGTATATCAGTGTAGTGTAGAAGTGTAGTTGTGTTATTATTGTACACCTATTTATTTGCTCTGCTTAGTACCAA TTAAATAAGAATTTGCACTTCACTATATTTACTAAGTATTATTTAGATCCATTCAGTAAGAATATCCCTACATTGAATTTTCAACTCTTCTTTTATAGTA ATATTCATATTACCGGTCATGAGTTTAAATCCCG
• Tissue: pods
• Gene name: LI_gene_171350;
• Additional information: details;

Expression of Ll_transcript_415282

FPKM

• PAB: 6
• PNAB: 1.7
• PS1: 1.6
• PS2: 1
• PS3: 2.7
• PW1: 1.6
• PW2: 3.2
• PW3: 3.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_415282

• Blastp: Ultraviolet-B receptor UVR8 from Arabidopsis with 32.33% of identity
• Blastx: Ultraviolet-B receptor UVR8 from Arabidopsis with 32.05% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (AT5G63860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456541.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF00415.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;