Ll_transcript_415283

• Id Trinity: TRINITY_DN49682_c4_g1_i7
• Name Transcript: Ll_transcript_415283
• Sequence: TTTAATTTTTGGAAACTTTTGCTAACTTGGTTGTGATTTTAACCTTTAATATTTTTAATTAAATTTCTTCTTTCTTTTCCTTTCAATTCTCTTCAATTTC AAATATTTATCTTCTCTTTTTCGATTCTAAGGTCAATAATCTATGGACATTGATAAAATTTTGGGCACAACGAAACCTGCAAGTTTTCCAAGGAAAAGTG CCATTTATGTGTGGGGATACAATCAATCTGGTCAGACAGGGAGAAAGGGGAAAGAGGATCAGCTGAGAATTCCGAAACAGCTGCCTCCTGAACTGTTTGG ATGTCCAGCTGGTTTCAATGCAAGGTGGTTGGATGTTGCTTGCGGTCGCGAGCATACAGCAGCAATAGCCTCTGATGGCTCACTTTTTACTTGGGGGGCT AATGACTTTGGTCAATTGGGAGATGGAACTGAGGAGCGAAGGAAACATCCAAAAAAAGTAAAACAACTAGAGTCAGAGTTTGTAAAATCTGTATCATGTG GAGCTCACTGTTCTGCTTGCATTGCAGAACCTCGTGACAATGATAGTACCGTATCGACTGGAAGGCTCTGGGTTTGGGGACAAAATCAGGGATCAAATTT TCCTAGATTGTTCTGGGGTGCCTTTGAACCTAACACAATTATCCATGAAGTGTCTTGTGGAGCTTCCCATGTGGTTGCTTTGTCTGAGGCAGGCCTTCTA CAAGCTTGGGGTTACAATGAGTATGGTCAACTTGGCCGAGGCGTTACTTGTGATGGACTGCAGGGGGCTCGTATTATAAGTTCTTATGCGAAGTTTCTTG ATGAAGCCCCCGAGCTTGTGAAGATTACCAAAGTGTCATGTGGGGAAAACCACACAGCAGCTGTTTCTGATGAGGGCGAGGTTTACACATGGGGGCTAGG AAATATGGGCCAACTTGGGCATTCTTCACTCCAGTATGGGGATAAAGAGCTACTCCCGAGGAGGGTGGTTTCCCTTGACGGTATTATCATAAAAGATGTG GCATGTGGTGGTGTACATACTTGTGCTCTGACTAAAGAAGGAGCCCTTTATGCTTGGGGTGGTGGTCAATCTGGTCAGTTAGGCCTTGGCCCCGAAAGTG GATTGTTCTCTTGCGTTGCTAATGACTCTCGGACATTTTTTCGAAACATTCCAGTTTTAACTGTTCCAAAAGATGTCAAATTTGTTGCATGTGGACATTC CCACACTCTTATTTCTATGCAGGATGGCCGGATTCATGGGTGGGGCTACAATAGTTATGGTCAAGCAGCCAACGAGAAATGTACATATGCCTGGTATCCA TCACCGGTTGACTGCTGTGTTGGGGAGATCCGGAAACTAGCTGCTGGTGGGGGCCATTCAGCCGTGTTGACCGATGCTCATTCATTGAAGGAGTTGTGTG AGTTTGTTCTTGCAGATTGTATGACTTCATCCAATGCTGCTAAGATTGAGGATATTGCTTCTACAACTGGATCAGATGCTTTAGCACGCCTTTGCGGAAG AATCAGAGAGTATATGGTTACTGGTGGTGATCATGAACAGAATGAGGTGGACAAAATCTGAGGAAAAATGTGAACAAAGTATTTATCATAATTTATTGTT GTAATGTATATCAGTGTAGTGTAGAAGTGTAGTTGTGTTATTATTGTACACCTATTTATTTGCTCTGCTTAGTACCAATTAAATAAGAATTTGCACTTCA CTATATTTACTAAGTATTATTTAGATCCATTCAGTAAGAATATCCCTACATTGAATTTTCAACTCTTCTTTTATAGTAATATTCATATTACCGGTCATGA GTTTAAATCCCG
• Tissue: pods
• Gene name: LI_gene_171350;
• Additional information: details;

Expression of Ll_transcript_415283

FPKM

• PAB: 18.9
• PNAB: 7.5
• PS1: 12.9
• PS2: 5.6
• PS3: 7.5
• PW1: 7.3
• PW2: 4.3
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_415283

• Blastp: Ultraviolet-B receptor UVR8 from Arabidopsis with 32.33% of identity
• Blastx: Ultraviolet-B receptor UVR8 from Arabidopsis with 32.05% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (AT5G63860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456541.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF00415.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;