| Id Trinity | TRINITY_DN49691_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_415623 |
| Sequence | GTTTGGTTGAAAAAGTCTAAAATGCCTAATTGGCTAAGAGGCATTATCCTCTTTAAGGACAGAACCAATCTACACCTCCCAAAATCTGAACAAGAGAATG ATGTGGAAGAGAAGAACACTTCTTCACTTGATTCATTTCTTCTTCCTTTATCCCAAACTCTTGTTTTGATAACTTCCTTCATCATCACCATGGGAACCAT TTTCACTCCCCACTCTCTCTCCCCACTTTTCAAAACCAAAGCTTCATCCTCTAACATCATACTCTCTCCACCCCACCCCAAGTCAAATTCTCCTTTTTTC TCAAAACCCATTATTTCATGTCTCAAAAAGAACCAAACTTTATCTCTTAAACCATCCTTGCCTGCATGCACAAGTTTGTTGACTCATGCTCAACATGGCT TAGCAGCTTTGGCTATTTCCTTGTGTCTCAGTTTTAGCCCACTGTTTCACACTGGCAATGCACTTGCATCTGAATTTGATGTACTTAATGAGGGTCCACC TAAAGAATCTTATGTGGTTGATGATGCAGGAGTGCTTAGTAGGTTGACAAAGTCTGATTTGAAGCGGTTATTGTCGGATTTGGAATCTAGGAAGAACTTC CACATTAATTTTATTACTGTTCGAAAACTCACGGTTAGTTATATTATTACATAACTATGTGCTTATGTTAACTGTCTTTGTTTGAAGTTACAACTTACAA AAATGTGAAAAGGTGGACAAATTCCTATCAGGTGGGTTGTATTATGTTATTTATGATTTAGTTATTCTTGTTTATATCGTTAGTTATTATTTGCATCATT ATTATCTTATTATTTGTAACGGTTTTTTTTGCCTATATAATAAATTACTTGGACCGTCTCATATTTGAGTTTAACCGATCTTAAACTTCTAAAAGGCTGA TGCTTACATTCCCTGCAATGCAACTAATGTAACATGAAATGGCATAATGAAATGCTAAACAACAATCTACGCACACTTAGGTAGCATTTGACATATGTGC CAGGATGAGTTATGTTGTATGTTTGGTATACTTTATGAATATAAAACAGCCGAAAATTAGAAGTAGAACATTTTGGTCAATGAAGGGGTGGAAGTGGAAC CAAAGAAACTTACTGAATAGAACATCCTGATTCATCTTATTATGTCCACACACCAAACCTTACCTTATATATAGTTACCTCAAATTTGCATAATCTTATC ATGCTTCCTTTTCTACGCATCTATGATGTAACTCTGATGCCATTTAAGCAAATGTACGGGATGTGTATGTGAAGCTGAGTGTACTTGGCATTTTCCAATG CTAAAGATTTTGGTTTAATAATGTGTTTGCAGAGCAAAGCTGATGCTTTTGAGTACGCGGACCAAGTTTTGGAGCGTTGGTATCCTTCCGTAGAAGAAGG CAATGACAAAGGTATTGTGGTGCTTGTCACAAGTCAGAAAGAAGGAGCTGTGAGTGGTGGCCCGGCTTTTGTCCAAGCAGTTGGAGAAAATATCCTTGAT GCCGTTGTCTCAGAAAACCTTCCAGGTACTTCCTAGTTCCTAATTCCTACCCCTTGGTCCATCACCCGACGGTTACAAAGGAATTCCAAGACTGGCTTTA AGTTTTTCGACTAACCAATATGGCTAACTTGAATTGTTGATTGTCATAACATGCTATGCCTACAACAACAAACACCAAACCTTAATCCCATATAACATGC TTTGCCTACAATAGACTGATAAAGGACAAATGAAAGTTTTAATTGGAAGGTCATAACATGCTTCCACTAGATGAGGATTGCGTTAAGCAGTCAACGATCA ATATAAAATTATGTTGAATCTTAATGACATGGACAACCATAAAACTAGGCCATCTATAGCTTGGGTATAATGTTGACGTAGCAATATAGGATATTATTTT GGCATCTGATCCATATAGCCGATGCCACCAAATGGGAAAAGACGTCATCATTGTTGGTATAGTTGTCTTGGTCAGTATAATTGTTGGCTTGATGCTAATG CTCGTAAGAGCTATCCTCCCATTTTTCTGTTAAAACTAGGCAACAAGTGTCCAAATTATAAATCCTTATACTTCTTTTTTGATTGTTTACAGAAATAATT AATTCTTCTTGATATACAACCTTGCTAAATTTGAATTCCCTACAGTTAGAGAAGCTCATATTTCTAATTCATGTCTCCGCCATTTTCTAACCTCTCTTTC AATCTATAAGTTAACTATAGGGGATGTTTCCGGGTCTTAAAAGGTTGACACATATATGGGCACTTTGGATAGTTTGGATTCCTGCATTAAGCTACCATCT ATTTACATATATACTCTTACTCGTTTGAATGTATTCATATTATTGATATTCTGCAAGTTTGTACTATTTATAAAACTTGTCAAACTTCTGAAGTTTTCAT CAATAAGGAGCAGCAGTAATTGATATTTTTCGGGTCCAGAAAACCACCAATAACTGGTTTTAATATGCAGTATTGGCCACTGATGAGAAGTACAATGAAG CTATTTACAGCACTGCGAAACGGCTAGTTGCCGCCATTGATGGCCTTCCGGATCCTGGTGGGCCCTCTTTTAAAGACAATAAGCGAGAGTCTAACTACAA ATCTAGGCAAGAGACGGAAGAGAAGCGTGGTCAATTCTCTCTTGTAGTTGGAGGTTTGTTGGTCATTGCTTTCGTTGTGCCTATGGCACAATACTATGCT TATGTATCCAGGAAGTAAGAAAATGGTTGTATAATTAGATCTGTCTTGCAAATTCTCACTCTTCAAATTCAGATGTATTATGTGTAGTTGTAACCATTCA AATGTTACAATTGAGGTTGAGAATGTTGGAGAATAAGATCAGGGTTTTGGTTGTAAATACAATGCCAAAGTGTTGGATTATTATATGACAGTTTATAGTA ATAAGACAAAGGAAAATGCTTGCTACACTTCTCTTATGAGTCACATCTCACATATGTTGAATTAACATGATATGATATGCAGTATGGGGTAATTCATATT TCCTCCTATTGGAATGGAGGTGAGAGACCAATGTTTCTGATAATGTATGCACAATTGATTAAACTTCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_171437; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415623
| Blastp | UPF0603 protein At1g54780, chloroplastic from Arabidopsis with 54.73% of identity |
|---|---|
| Blastx | UPF0603 protein Os05g0401100, chloroplastic from Oryza sativa with 87.8% of identity |
| Eggnog | of methanol dehydrogenase type(COG1512) |
| Kegg | Link to kegg annotations (AT1G54780) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428697.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |