Id Trinity | TRINITY_DN49691_c1_g1_i6 |
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Name Transcript | Ll_transcript_415629 |
Sequence | AACCAATCTACACCAACCAAAATCTGAATCAGAGAATGACATGGAAGAGAAAGAAAACACTTGTACATTTGAACCCTTTCCTCATACCCTTTATCCCAAA CTCTTGTCTTCCTAACATCCCTCATGGGAACCATTTTTTCTCCTCACACTCTTTCTCCACTCTTCAACATCAAAGCTTCAACCTCAAAAACCCTTGTCTC TCCCCAACCCAACTCAAATTCTAAAATTTACTCTAAACCCATTATTTCATGTCTCAAAAAGAACCAAACTTTATCTCTTAAACCATCTTGGCCTGCATGT ACAAGCTGGTTGACTCATGCACAACATGGCCTAGCAGCTTTGGCAATTTCCTTGGCTCTCAGCTTTAGCCCACTTTTGCACACTGGCAATGCACTTGCAT CTGAATTTGATGTACTTAATGAGGGTCCACCTAAAGAATCTTATGTGGTTGATGATGCAGGCGTGCTTAGTAGGCTGACAAAGTCTGATTTGAAGAGGTT ATTGTCGGATTTGGAAACCAGGAAGAACTTCCACGTCAATTTTATTACAGTGAGAAAACTCACGAGCAAAGCTGATGCTTTTGAGTATGCTGACCAAGTT TTGGAGCGTTGGTATCCTTCTGTAGAAGAAGGCAATAACAAAGGTATTGTGGTACTTGTCACTAGTCAGAAAGAAGGAGCAGTCAGTGGCGGCCCGGCAT TTGTCCAAGCAGTTGGAGAAAATATCCTTGATGCCACTGTCTCAGAGAACCTTCCAGTATTGGCTACTGATGAGAAGTACAATGAAGCTATTTATAGCAC TGCGAAACGGTTAGTTGCTGCCATTGATGGCCTTCCTGATCCTGGTGGACCCTCATTTAAAGACAACAAACGTGAGTCTAACTACAAAACAAGGGAAGAG ACAGAAGAGAAGCGTGGACAATTTTCTCTTGTAGTTGGAGGTTTATTGGTCATTGCTTTTGTTGTTCCTATGGCACAATACTATGCTTATGTATCCAGGA AGTAAGAAAATGGTTGTATAATTAGATCTGTCTTGCAAATTCTCACTCTTCAAATTCAGATGTATTATGTGTAGTTGTAACCATTCAAATGTTACAATTG AGGTTGAGAATGTTGGAGAATAAGAT BLAST |
Tissue | pods |
Gene name | LI_gene_171437; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415629
Blastp | UPF0603 protein At1g54780, chloroplastic from Arabidopsis with 72.01% of identity |
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Blastx | UPF0603 protein At1g54780, chloroplastic from Arabidopsis with 72.01% of identity |
Eggnog | of methanol dehydrogenase type(COG1512) |
Kegg | Link to kegg annotations (AT1G54780) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421308.1) |
Pfam | TPM domain (PF04536.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |