Id Trinity | TRINITY_DN49695_c2_g1_i6 |
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Name Transcript | Ll_transcript_415718 |
Sequence | AGTATCAAGACGCAGAATGGTATCATGAAACACTTTTACTAGATAGCATGTTCTGTATTTCGTAGTTACATTGGTTTCGGTGGTCTTGTGAATTTTTATT TCAGTAATGCATCATTTGCATGGCAAACATAATCATATCAAAGATGAGGTACTGAATGTTGGGAAGCTGAGTGCTAACAAAGAGCATATAAGATAAGGAG TTTTTGCTCTGTTCTTTATTGTGCATTTTGTGTTCGAGTTGTGTCTTTGGTCTATTACGCCATATTTAACCTGAGATCATCCAACTATACCTCTTCTTGG ATAGCCAAATAAGTGATCTGTACCTGTAGATTTCGCGAATTCCAAAGCATAACAAAATTGTGACTTTAAAAATGTCTCGTAAACATATAACTCATAATAT CGCATTTTTAATATTTCTCCGATTTGATGCAGGCTGCTTTATCTTCCTGGGGCTATTATAGCTGCTGTTCTTGGGATCATAGTTGATATGCCAGTTGTAT CATTTGTTGCCATATGCAAAGGCCCTTACATGCTTTTTAAAGGCTGGAGTCGTTTAATTCATGACCTCATCGGTCGTGAAGGCCCTTTCTTGGAGACAAT ATGCGTGCCATTCGCAGGCCTTGCTATCCTTCTGTGGCCACTGGCTGTTCTTGGGGCTGTTCTCGCATCCGTGTTAGTTAGTATCTTACTTGGTGCCTAT GCAGGTGTTGTTGCTTATCAGGAGTCTTCTGTCTTGTCTGGCCTTCGGTACATCATTGCAGCTTTGTCCATATATGATGAGTACAGCAATGATGTTCTTG ACATGCGAGAAGGGTCCTACTTCCCGAGGCCTCAATATCGAAAAAATGAAAAACTGTCACGAACAACTTCCGACACAAATTCGCCTCCCAGAACTAAACC ACAAAGGGTTCCGTCTCGCACATTTTCACTGAAAGATAATATTGCTGAGTTGAAACCACTTGAGCTGTTGGATGGGTTGTTCAAGGAATGTCATAATGTC GGAGAAGCATTGCTTTCTCAAGGACTAATAACACGCGAAGACATCGAAGAAGCCGGATCTGGTAAAAGAAGTAAAGTCATTAGTATTGGTTTGCCAGCAT ATTGCCTTCTTCAGGCACTATTGCGCTCGGCAAAAGCGAATTCCAAGGGTTTAATGATAAATGATGATACTGAACTAACTACCTCAAACAGACCAACGGA GAAATTTTTCGAGTGGTTCCTTAATCCCCTTTTGATACTTAAAGAACAAATCAAAGCGAAAAATCTTACTGTTTCAGAAGAAGACTATTTTTGCAAATTA GTTCTCTTGTATGGTGATTCGAAGCGGGTGAAAAACTCAACTATTGGCCCAGCTCCTGATTCTGACCTCAAACTTGGTGAGCTTGATGGATTGGCTAGAA GGATCCAAGGGATCACCAAATATATCACAAGGTTTCCGACCTACAAACGACGCTTCGATGATCTCGTAAGAACGTTATCTGATGAACTTGCTGACAAGCA CGAAGCATCATCAATAATCAGATCAAAGAGTGCCTTTGCTAGGATTATTAGTATGAAATCCTTCAAAGGCAGAAGAACTAATGGTTCAGGTCAAGAGTCA GAACATGTAATAGATTTGGAAATTTCAGCATAAGAATATCATGGTACATATTTATATCCCAAAAAACAATGTATCATATCATATGTATAGTCTTAAAACC ATTTCCATGTTTTTGCTTGGTCTCCTTTTGATCATTGCTGACCCTGCTTGCTTCTCTTACACCTTTACCTACTTGTTCATGGCTTTGACATAGAAAAATG AACAAAACTTTTAGTATAAGGCATTAAAAGGGCGACCCGGTTCACAATGCTGCACTCGGTGGGATTTGGAGAGGGTGGATGTCGTCATTTTTGCTCCGTA AGCGGAGAAACAATCTTACTATTGCACGAGACTCGACTGGCCGATTTATGAACTGTCACCATGGACCAATAAGTAAACATTGATCTCCAAGTGTTATGCA TGGTTTTAAAATGCAACAGAAGTATTATCTTGAGTTTCAAATATACACTTAAGTTGTCAAACATACACCTAAGTTGTTAAATATACATTATTTTATATCT AAGTTTTTATGGTTTGATAATATCTAATTTTCTTTTTTCTTTCTTTCTTTTTTTAATAGATTTGGTTTTGTCCTTTCACCCATGCTGGAATGCCGTTTTG CAATCATAGCTCACTCCAGCCTCG BLAST |
Tissue | pods |
Gene name | LI_gene_171479; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415718
Blastp | Uncharacterized membrane protein At3g27390 from Arabidopsis with 54.95% of identity |
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Blastx | Uncharacterized membrane protein At3g27390 from Arabidopsis with 55.69% of identity |
Eggnog | NA(ENOG410Y9F4) |
Kegg | Link to kegg annotations (AT3G27390) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429112.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |