Id Trinity | TRINITY_DN49698_c6_g1_i7 |
---|---|
Name Transcript | Ll_transcript_415615 |
Sequence | AATCATAGAATCAATATTCATTATTCAAGGGCAATTATTCTCCTTAAGCAAGGTATCGGGTTCGATCCTTGTGGATGGGAAAATGTCTGTTGGGAGAGTT AGCCTTACATGTAGGAAACAAAAAAATATGTATGTTCGCAAGTGGAGATGGTGTTTCAATGATTTGAACTCATGACTTCCAAGGTTGTGAGACAAACAAA ATTATTGTTCCATGGAGGCTCACCCTTTGAATGGAAACAATGGTTATGCATTATATTTCATTAGGCAAGTCCGTGATGCTGCACGGCTGCACCTGATGTT TGCCTTCTAAATTGAGTGCAGGTATTTGAGGATGGTTACTCAATATAGGAAGGTGGCATCACGAGACGGAGTATGATGAAGCTTGGGAGAGATTATTTGT GAACTGCTTTTATAGGCTTGGATATAACAATATGGAAGATGATAACGGGTTGGAGCTGAGCTTGGGTCTATCTTGTGGTGGTTCTTCTGTCAAATCGAAG AATAAGGATGGTAGCTCCTCGGATACTAGGACAAAAGAGGTTGGTAGAAGTGGCAAAAAAGTTGATGATTTTAAAGGCATGTTTGATGCTGCTCCTCAGA AATCAGATTCAGGTACTGGGATGGGAAGATCTGATTCTTCAAAACATGAGGAGAACTTCTTTAGTGACCTTTCGAAGGGTAGAGAAGAGAGTGCACCATT GAGTTTAAATCAGAAAGGATTTTGGGCTGCAAATAGTATTAAACCTGTTGAGTTTGAGGAAGACAAACAGTTAGAAGCAGTAAATAAACGGAAAATGTCT TTTGATGACATAAGTAATCAAAAGAAGCATGAAAGTGGTGTTCATTATGCTGATTTACACGACAGGACCAGAACACCACACATTTCTTTGACGGAAGATG GCTCAGCTGCTGAAAACGAAGATGTGGCAGATTCTGAAGTTGAGAACTCCACCTCTAGGCCTATCTCACACCACGACGATGGTTCTAAACAATTCATGAG AGGTAATGTTTCTTTTGATGCTCCAAAAAATGTTCGCGAAGTTGCTGACTCGAGTGCCACTAATGGGGAGAAAAGGTTACCAGGTTCATCAGAAAATGAT TTTAAGAATACAAATTTGACTTATGGTGCTTCCTATTCTGTCCAACAAGTAAATATGATGAATTTGACTTACCCTACACCAGTTAAAGAGTCCAACTCTG TCCGTGCACCGAGCCCTCAGACATCTGGAGCGATGCATGTGATGCCTACTGCAACTGTTGAACACTCAGGAGCCCATACTGTAAGTAGTGGAAGCTTGCC AGTGATGTTTGGCTATCCTTCTGTTCAGCTTCCGATGTTAGATAAGGATAACTCATGGGGTTCGGTCTCTTGTCCTCAACAGCTACACCCTTCCTTTGCT GGGAAGGGTCCACCAAATGCAGGTAATCATGATATGGATGGATTGGAAGCTGATGATCAGTCATAACCTTTATAAACTTCTAAAGTTACATGAACAAATG GTATGTGGATTTCAAATGTTGTGGATTATACATTTATATTATATACAGACATCGAGGGTGAGCCTCGACACAACGATAAGGTTGATTGCCTTGTGACTTG GAGGTCATGTATTCAAATTCTGAAAACAACCTTTTTGCTTGCGAGGGTAAGGATGGGTACATCTAACATCCCCATACCTACTAGGTGGGAGGCTCAAGCA CTAGGCCGCTGTTTATTATATACAGACGTCCTAATCATGAGGTTCATAAATTAAATCTAAACACTCTAAAGCCATTAGATAATTGGAATGCTAGTTAAGT AGTGCTTGGAGCCGTTTCAGGTCAAAAGTTAATCACATCTCCATTCATCTATCTGTTCATTCAACAGTTTAACATATGGCTTTTATTTTGTTGCCCGACA CCATTTTTAAGTTTCTGGTGTATCAATATGTCTTTTACTGAGCTTTTATTGGTAATCTGGTTGGATGTGACATTATGCTGTTTTGTGTGTTTGTAGCTGC CATGCGTGTAATCCCAAATAAAACATCTGAGGCCATGGCATATGAAGGAAGATCACTAGAAAGACCCAAAGTTGGTGCAAAGCAGCGCCTCACTGAAGAA GGCTCTTTCACACAACCTGAAGATGTGAAAGGTAGCAGCACAAACTTGAGGGCAAAAGATGTATCAGACCAACCAACAGGAGAAGAGTCCACAATTGATT TTTCAGTTATTAAACCAGGTCTTGCTGCAGATCTTAAATTTGGTGGCGGTGGTTCCTGCCCAAACCTACCCTGGGTATCCACCACAGGTTCAAATGGTAA GACAATATCCGGTGTTACGTACAGATACAGTACTAATCAAATTAGAATTGTTTGTGCATGTCATGGTTCTCACATGACTCCTGAGGAGTTTATTCGACAT GCAAATGATGACCAACCCAATCCTGAGGGCGGTGCAGTTTTGGGAGCAGTAGCAAATGGCAATCCTGCAGGCTCTGCTCACAGGTAGGTTATTGTAATAT CAAAGTTGAAGTTCGCCGATAGCTTTTAACGGGAGAATCTTGGAAATCAAGCTTTAACTTTATGTAATCAAAGAGATTCCTTACAATTTTTTCCATGTAT AGATGTTGTGAAGCTACCTTCTATTAGTTGTATTTGCGCCGCAATCAAGGTTGCAGCAACAAGATGTTGTGGTTTCCTTTTTTGCCACCAAAAATAGTAG GTAGTATTAGCTATGCAATCAGGATTGCAGTTGTATGCAATATTAATAGCCTAGTATCTCTTGAAATGGTAACTAAGCACTTGATTTTGTGGGTGTATGA GTATATCCACTTATAAATCATGTAGGAGTTAACATCACAAATCATTTTAAATTAAATGAATGGTGAGTTCATAAGTATTCTGACAAGCAAAAGCTTATTT TCGATTAATATTTTTCGACTTTTATCACTGAAAGTTCCCCATTTTAGâBLAST |
Tissue | pods |
Gene name | LI_gene_171518; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415615
Blastp | Ninja-family protein mc410 from Nicotiana with 46.27% of identity |
---|---|
Blastx | Ninja-family protein mc410 from Nicotiana with 44.74% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (107806815) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446356.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |