Ll_transcript_415617

• Id Trinity: TRINITY_DN49698_c6_g1_i9
• Name Transcript: Ll_transcript_415617
• Sequence: CACATCTTTGGTCAGAAAAATACTTAACTATTAAACTTTTGACTTAAATACATTTTTTCGAGACATGATCACATTTACTGACACACTTTTTAGGACATAC GATATACTACCATGCTTGAGTAATAATAGATAATAATAGATATAGGAATGAGTTTAATGTTTTTATGTCCATTAGCATAAATAAAAAAATGATTCAAAAA GGGTGGCCTAGTGCTGAAGCTCCTACCTACTCGGGGAGGGTAGATATATGTCCGCAAGGGGAGGGGCTGTTTAAATGATTTGAACCTGACTCCCAGGTTA TAAGGCAAGCAACTTTACCGTTACACCAAGGCTCGTCCTCTGTATGAAAATAATAATTATTTATTCTTTTTGTTATCTAAGCCTTGGATGGTGGAACTGA TATGTGCCTTCAAAGTGAATGCAGGTATTTGAGGATGGTTAGTTATTGTGGGAAGGTGGTATCATGAGAACTGCCTTGATAGGCTTACATATTACAATAT GGAGGATGATAATGGGCTGGAGCTCAGCCTAGGTCTATCTTGTGGTGGTTCATCTGTCAAATCAAAGAATAAGGATGGTAACTCCTCGGATACTAGGGCT GAAGAGGTTGGTAGAAGTACCAAAAAGGTTGATGAATTGAAGGGCATATTTGATGCTGCTCCTCAGAAATCAGATTCAGTTACTGGGATAGGAAGATCTG ATTCTTCAAAACAAGAGGAGAACTTCTTCAGTGATCTTTCGAAGGGTAGAGAAGAGAATGCATCATTCAGTTTAAATCAGAGAGGATTCTGGGCTGCAAA TTGTAACAAACCTGTTGAAATTGAAGAAGACAAACAGTTAGAAGCAGGAAATAAGCGGAAAATGTCTTTTGATGAGATGAATCATCAGAAGAAGCATGAA AGTGGTGCCCATCATGTTGATTTACAGGACAGGGCAAGAACACCACACATTTCTGTGACAGAAGATAGCTCGGCCGCCGAAAATGAAGACATGGCAGATT CGGAAGTTGAGAACTCCACCTCTAGGACTATCTCACTCCACAGTGATGGTTCCAAACAATTCATGAAAGGTGGCATTTCTTTTGATTCTCCAAAAGATGT CTGTGGGGTTGCTGACTCGAGCGCCACTATTGGGGAGAAAAGGCTTTCTGGTTCATCAGGAAAAGATTTTAACAATGTAAATTTGACTTATGGTGCTCCC TTCTCTGCAGCACATGTAAATTTGATGAATTTCACTTACCCTCCTTCACCAGTCAAAGAATCCAACTCTGTTCGTGCACCAAGCCCTCAGATATCTGGGG TGATGCACGTTATGCCTACTGCAACTGGTGAACGCTCAGGAGCCCAGCCTGTGAGTAGCGGGAGCATGCCAGTGATGTTTGGCTATCCTTCTGTTCAACT TCCGATGTTGGATAAGGATAACTCATGGGGTTCGGTCTCTCGTCCTCAACAGGTACATCCTTCCTTTGCTGGGAAGAGTCCACCAAATGCAGCTGTTATG CGAGTAATCCCAAATAAAACATCTGAGGCCATGCCATATGAAGGAAGACCACTAGAAAGACCCAAAATTGATGCAAAACAGCACCTCACTGAAGGAGGTT CTTCCTCGCAACATGAAGATGTGAAAGGCAGCAGCACAAACCTGAGGGCAAAAGATGTATTGGACCAGTCAACAGGAGAAGGCCCCACAATTGATTTTTC AGCTATTAAACCAGGTCTTGCTGCAGATGTGAAATTTGGTGGGGGTGGTTCCTGCCCAAACTTACCTTGGGTATCCACCACAGGTTCAAATGGTAAGACA ATTTCTGGTGTTACTTACAGATACAGCACTAATCAAATTAGGATTGTTTGTGCATGTCATGGTTCTCACATGACTCCTGAGGAGTTTGTTCGACATGCAA ATGATGACCAAGCGAATCCTGAGGACGTTGCAGTTTTTGGAGCAGCAGCAAATGGCAATCCTGCAGGCTCTACTCACAGGTAGATTATTGTAATATGAAA GTTCAACTTCACTGATAACTTTTTATGAGGGAATCTTGAAAATCAAGCTTTAATTTTATGTACATCAATCAGATTCATCACTTTTTTCTTCCTGTATTCA TGTTGTGAAGTTACCTTCTATTAGTTGTATTAGGCTGCAATGGAGATTGTAGCAAAAGATGATGTGACATTTCCTTTTTAGCCACGAAAAAAGTAGTATT AGCCCTGCAATTGTATGCAATAATAGCCCAGTATCTCTTGAATGGTAACTAAGTATTTGATTTTGTGGGTGTAAATATACTCATATCATTTAGTGATTTA ATCACAATTCATCTTAAATTGAATCAATGGTGAGTACATAAATACTTTATAACAAACAAACTTATATTCAAGTGTAACCCGTGACACAATGGTGAAGTTG TTGCTCTCT
• Tissue: pods
• Gene name: LI_gene_171518;
• Additional information: details;

Expression of Ll_transcript_415617

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_415617

• Blastp: Ninja-family protein mc410 from Nicotiana with 45.97% of identity
• Blastx: Ninja-family protein mc410 from Nicotiana with 45.19% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (107806815)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423959.1)
• Pfam: TPL-binding domain in jasmonate signalling (PF16135.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;