Id Trinity | TRINITY_DN49700_c2_g1_i3 |
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Name Transcript | Ll_transcript_455183 |
Sequence | CTGTATTCTTCTCAAAATATCGATTCTTTGAGTTTTTACTAATCTTAAACTGCATGAGACTATCATTCATCTTCATGCTTTTCTTTTTCTCTCTCTCTCA ACTTTCTGCTGAAGTGGAAGCTATCTGACATTTTCAAAGCATGGATTTCTCTGGTGGTCACAAAAATAGAGGGGAATTGAGAATTCATGAGAGTTTGGAT GAGCTAAGGACTGATTTGGCAGATCACATTGCTGAATTATCAGATGCATCTGTGAAGGAGCGCGGATATTTTTCCATTGTTTTATCTGGTGGTTCTCTCA TTGGCTTAATGGGAAAACTCTTTGAAGCACCTTATATCAAGACAGTGGACTGGTCCAAGTGGTATATATTCTGGGCCGATGAGCGTGTTGTGGCGAAAAA CCATGCTGATAGCAATTATAAGCTCGCCAAAGATGGCCTTCTGTCCAAGGTTGTACCCTCAAGTCAGCATGTTTCTTTAAAGAATGGTTGTTCTCGGAAT ATTTTGGAGGATAATCAGATAATGATACAATCAAGTTTTGAGTATTTAACTGTTCTTTACTAATTTAACTTCTTTCCTGGTTGCTTCTTAAAAGGGAAAA TCAAACAAAAATGGAACTAGTATATCAAATTTTCAAAAGTTGATGGGCTTTGATTTCTTCTTTTATTGCTAAATGACTGAGAAAATTCAATTGCTGTTTT AATTTTGAGCATCTTTAGATAACCTTCTTGAATTGCTTTGTTCACATGAAATATAAGATTTTTACTTCAAGGTAACTCTTTTTGAATGTCCATTTATTTA TATATTCAATATTGAGTACTTTTTGAATGTCCACTTATTTAGCTGTTTGGGTCTCATTTTAACTAGTTACCTTATTGAGATTTACATTTATTCTGATGTG GATGTTGAGCGTACTGAGAGTTGATAATGATATTTTGTTTACCCTTTCTAGTTCATTGAATTTGGAGACATACATAATAGTTTAAGTTTTAGATATGTTA GAAGTAGAGTTCTAATCCTGATAAGGATTGACCTTGATAAAGAGTCTGTGCTGACAAGCATGAGATTACTACCTAACCTTACTGGGCTTGGGCCAAATAA ACCAGTAGATTTGTACAGTGCACTTGCACCCCAACTCAGTATTCGACGAGTCTAGTTACAGGGCGAGTTGTACACTGGGATGTATGAACGAATCTCAATT ATTTGGTTCCAAAAACTTCACTGTTGTGGTTGCGTAGCTGAAGATAGGAGAGCTACGGGATCGGGATAGAACATTTAGTTGGCTTCATGAGCTTTTGAAG GTTGACATCGACCATATTGAGTTGGTTTGATGTGTTCATGGGAGATAAACCATGGTTGCATCGACAAGATGACTGGTGCATGGTACGGTGGACTTTCAGG ATTGATATCAACTGTTATCACATCAGCGAGATGCTGAGGGCACCAGCTTGGTGTGTTGGCTGTGGTGTAAGTGCACTGATTTTGATCGATAAGATTTGAC GAGGATTAATGTATCAGATTATATTATTAAATAGAAAATTAAGACTTGGTTAGATTATAGGATTGAGATTGAAAGAGTCTTGAGTTGCATGCCTGATTGT TTGTTGGCACCAGAGTGACCGGAACCTTGATGCTTTGGCAAGTTGGCGAGAGACACGGTCATGAGCATTGGTAATTCATGATGACAAGGAGGTAGATCAA TTTCTGTGCCAATCTTCATTGATCCTAAAAGCGTATATTTTATGTTTCATAAGATGGAATTTAACTAAAATAATGTTCATTTTTAACCCAATTCCATGTC TTATGGGTGAGGTCTCCAGTTTCAAATTCACTGGTATCGACCCAAGTTGTATTTAATTTTTTGGTATTCTTCTGAAAATCTTCCCAAGCAAGCATCTTTG TAAAGGAGATTTCCCCATATTCTAAGAAAATATAGATCTTGGGATATCATCTTGACGTCTGATTTGGGTATTACTTGTGATCCTCCTTTGTAATCCTTAG ACATTATTGGATAATCTTTATTTCAATATCGAATTATTATTTGTCACCCTGATGTGCAGTTCTAAAATTTCTGAACCACTTTGAATTTATGGAAAAAGAT TGTTGGATATAAAACCATTCATGAGCCTTCACCTAACAGCTTAAGCTTTTAGTATAGTTGGTCCTTGACATGGTAATAGTGCATCTATGACCAAGTGGCC AAGAGTTTATTCTTGCCCTTCCACTCCAACAGTTTTTAATTGTATTGCTACACACAAAGGGAATATGTTTCCCGTCAGCAGCAAATGCCTTCAATTTTTC CAACTCCCTTCCATTACAAGAAGTTCAGGTACTGATTTCAGAATAAAGGTCTCAGCAGTGCTGAGGACCCTTATAGTTGACAATTATGCTTGTAGGTTGT AGACTTGTGGCATTCTTGACTGCGATAAGCCGATACTATGAGAACCCTCTGAAGCAAAGCAGATAATCTCGTTCATCTGGTTTCTTTAGATTTTGAGCAG ATTCTGAGTTAAAGGATTGTGTGTCAGTGTCAATTAACTATGCAGACCATGTTTATTCTAGGAAAAGGCATCTCAATCAAACATTCCAGTCCATCCTCAA GATCACAGCTTTAAGACCTTCTGTAATGCTCTGCATCAGTGCATCCAATTAGATGCATCTTTTCAACATATAGGTTATGATACCAACCATAATAAAGCAC ATAAAATTTACTATATGCTTTCCCTGTAAGATATAGTTGTGCAGATGCAATTACAAGAAGCATTTTTTCTGTTATTCAGCTTTGGCATGTTATGAAGAGT GAGAATTTCTGAAAGAAAGAGAAACTATCTTGGAGCCTCATTTATCACCAAGTTTTAGAAATGATTTCTTAATGACAGTTTTATCAGTGCCCACCAAATT AGTTTTAGAGTAACCGTATTATAGTTGGTTGAACCTGAAAAAATTCCTGAGAGTATCGTGCACAATGAAAACCCATACAGTGCAATATGCAGTACTATAA GGTTGCCATGCCAAGTCGATCTAGACCTGTATGTCTATAACCCGTTATCCATGAGTATTTTCTTAAAATGTATATAGGTATTAAAGAATACGAGGAATGG CTGCTGGAAGACATTTCAAGTAGTCTTGAAATGAGTGGGTGAAGATAATATGCCTCCAATGCTTGGTTATCTAATTTGGTTTCATTTTGTTTATCTTGTC TTTGGTCATATATCATGTGAACTAATATTCCATGATTTCTTGGTTCATAGTTAATAGAATATCCCCTCGTTTTGTGTTCAATTATTATTAAGCACGGTAT CTAAATATCTAGTAAGACTAAATTCCACCCATCTCTAAATATCTAGTGAGATTACAGCTTGGTTGGTTGTTTTTATCTCTAAATATCTAGCTGTTTACCT TTTGTGTTAGTCCTACTATTGTCAAGTTTATGTTTGCTGCATCTTCTAAATTAGCTGAAATTTATTTTTTGTCCTAATTTGTTCTTTTTTCCATCTTGCA GTGTCCTATAAATTGAAATGTATGTTATCTTCTTGAAATCATAGGCCACACTGAATTAAACTTTCTAGCTATAAGTGTGATTATAACGAAACAGATGACA GCCCTTGATGGTCATAATGTACTGAGGAATAGTGGTGGGAAGAGGGAGTTCTTAGAATCTTGCATGTTTGGCCCTTGAGCAGATTATGTGTTTGCTATGT AAAAATTCCTTCTAGCAATTCAAGAAAATTGTTTTTTTATCACAGGTTAAGTAGCAATATAAGATGCACGATAATATTCCACCGGTGCACAACTTACTCT TGATGTATATCTGGATTTGTAACAGCTATTAATCAGGCCTTGGGTTTATGCACGATAATATTCCAC BLAST |
Tissue | pods |
Gene name | LI_gene_171537; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_455183
Blastp | Probable 6-phosphogluconolactonase 1 from Arabidopsis with 65% of identity |
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Blastx | Probable 6-phosphogluconolactonase 1 from Arabidopsis with 65% of identity |
Eggnog | Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion (By similarity)(COG0363) |
Kegg | Link to kegg annotations (AT1G13700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428719.1) |
Pfam | Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase (PF01182.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |