Ll_transcript_455737

• Id Trinity: TRINITY_DN49712_c3_g1_i2
• Name Transcript: Ll_transcript_455737
• Sequence: CAAACATCCTAATATATCCTCTACTTGAATTAAGTGGCTTTTTCATCATAAACCAAACTCTCGTTCCTTATTTTAGGATTTTGTTCAGTAACAAAAAATT GGAATCTAAAATGATAAGAAAACATGGCGATGATAAAAATTGATGAGTGGTGTGGTTCTCAAATAGCAACAGTAACAGAATGGCAGAAAAGCTTGGTCTC CCTCTTCTTCTCCCAAACCCACCTCAACCCTCACCCACTAAGCCCTTCACCCAAAACCATTCCACCACCACCACCACCGCCACCGCCACCACCGCCACCA CGCCCTCCTCATCCATTACCCTAACCCCTTTTCTCCAACACCTCTTCCTTGATCTCAATTCCACTTATCCCGATTCAATCGACGCCGTCCCTCTCTCCAG CCGCCGCAAGCTCCACCGTCTCTCCCCTCTTGCTCACCGAGCTCTCCAAGACTTACTCCACCCTTCTTTTGATTCAACTCGCCTCCGTGAAATTCTTCAC CACCTCTTCAAACAAGGCACTTCCTCTTCCGGTTTCTCCAGCTCTTTGTATTTGGATATTATAGGTATCATTAGGGGATTAGGGTTTAACAAAAAATTTG AACTTGCATTGAATGTCATTGATTGGATTCGAAATAGTGAAGAGTTTTCTGTTTCGCTTTTGAATGGTTCTCTGATTGCTGTGGTTATCAACATTCTTGG CAAAGCGGGTCAGGTTTCGACCGCGGCTTCTTTGCTGCAGAGTCTAGAGAGTGATGGGGTTGAGGTTGATGTATATTGCTATACTTCTTTGATAACTGCA TATGCTAATAATAAGAGGTATAGGGAGGCATTGAAGGTGTTTGATAAAATGAAAAAAGTGGGCTGTGCACCTACTTTGATTACTTATAATGCTATTTTGA ATGTTTATGGTAAAATGGGCATGCCTTGGATTAAGATTATTGATATTGTTCAGGACATGAAAGCTCATGCCCTTGCCCCGGATTTATGCACATATAATAC ACTTATAAGTTGTTGCCGATCGGGATCTTTGTATGAGGAAGCTTTTGAGTTTTTTAAGGAAATCAAGTTGGCTGGATTTACACCTGATATGGTTACATAT AATGCATTGTTGGATGTTTATGGTAAGTCCAGACGGCCTAAGGAGGCCATGGAAGTTCTGAGACAGATGGAAGGTAATGGTTTTCCACCTAGCATTGTGA CTTACAACTCGCTAATTTCGGCTTATGCTAGAGGTGGTCTGTTGGAGGAAGCCTTGGAGCTTAAAACCCAAATGATTGCGAAAGGGATTAAACCTGATGT TTACACCTACACCACACTTTTGTCAGGATTTGTGAAGGCTGGGAAAGATGAGTTTGCAGTGAAAGTTTTTGAAGAAATGAGAGCAGCAGGCTGCAAACCT AATATATGTACCTTTAATTCTCTTATCAAGATGTATGGTGACCGTGGAAAGTTTCAAGAAATGGAGAAAGTTTTTACAGAGATCAAGTTATGCAAGTGTT CCCCTGATATTGTTACTTGGAACACACTTTTGGCTGTATTTGGACAAAATGGATTGGACTCCGAAGTATCAGGAGTATTTAAAGAAATGAAGAGAGCAGG GTTTGTGCCTGAGAGGGACACCTTCAACACTCTAATAAGTGCATACAGCAGGTGTGGTTCTTTTGACCAAGCAATGGCTGTTTATGAGAGAATGCTGGAA GCGGGAGTGACTCCAGATCTTTCTACCTACAATGCTGTTTTAGCAGCTTTGGCTCGAGGAGGGCTTTGGAAACATTCTGAGGAAGTCCTTGCTGAAATGA TGGATGGACGATGTAAACCTAATGAGGCAACATTCGCCTCTCTGCTTCATGCCTATGCCAATGGTAAGGAGATTGAAAGGATGAATGCTCTTGCGGATAA TATATACTCTGGCAGAATTGAAGCTCATGCTGTTCTCTTAAAGACCCTTGTTCTAGTGAATAGCAAGGCTAATCTTCTAACAGAAACAGAACGCTCCTTT TTGGAGCTTAGGAGGAGAGGTATCTTACCTGACATAGCTACTTTGAATGCAATGCTATCAATATATGGGAGGAGAAAGATGGTAGCCAAAACTGAAGAGA TTTTGAACTATATGTATCAGAGTGGATTTACTCTGAGTTTGTCTACCTATAATAGCTTGATGCATATGTACAGCCGCACCGAACACTTCCACAAATCAGA AGAAATTTTGAGGGAAATTCTGGAGAAAGGTATCAAGCCTGATGTAATTTCATACAATATAGTTATTTATGCATATTGCCGAAATGGCAGGATGTCAGAG GCTAAAAGGATATTTAGAGAAATGAAGGACCCTGCGCCTACTCCCGATGTTGTGACTTACAACACATTTGTAGCAACTTATGCTGCTGACTCAATGTTAG TGGAGGCTATTAATGTCATTCGTTGCATGATCAAGCAGGGATGTAAGCCAAATCAGCATACATACAACTCCATAGTTGACTGGTACTGTAAGGTCAATTT GCAAGGCGAGGCAACTAATTTTGTTCAAAAGCTTGGCAATCTTGATCCACATATACCCGAGGAGGAAAAAAGCAGATTACTTGAACGCATAGCAAAGAAA TGAATGCTTGTTCCATGGTTCTGGAGGCTTCGCTGGAATGCTTCTTTGGCCTCTGGTAAGATGCCCTTAGCCTTCCTTTCATGACCATGTTGGGTTTGGA GGTTTGCATAAACCCACTGCAGTTGTAACTGGTTTATGTTAATAATTCATCACTAGTCTTCTGCTAAGTGAAACTTTGCAGCAAAGAGTGAATTTGCTAG TAGAAAGAGGGGAGGGGGTCGATTTCGAAGATCAATGGTTCAATACTTGTACAATATGTAGAATAGAGTTATACAGCAAAGAAATAAAGGAGGGAATAAG CAGTTAGACTTTTGAATAAGAGCTTCTTGTGAGATATCCTTCACATAAAAGCACTTCCAGAGAATTCCTAATTAATTAGAGACAAATTTTGATTTACAGC AGTTACCCAAACTACTCTGTTCCATTAAATAGCAGCACCTAGCTAGAAGGCCTTTGGTCCAGTCCTCCCGGATATATCTTGTACAAAAAAATGCCTAAGA AAGTGCTTTAGCA
• Tissue: pods
• Gene name: LI_gene_171638;
• Additional information: details;

Expression of Ll_transcript_455737

FPKM

• PAB: 1.7
• PNAB: 1.7
• PS1: 1.8
• PS2: 0.5
• PS3: 0.9
• PW1: 1
• PW2: 1.7
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_455737

• Blastp: Pentatricopeptide repeat-containing protein At5g02860 from Arabidopsis with 61.33% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g02860 from Arabidopsis with 65.84% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G02860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452481.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;