| Id Trinity | TRINITY_DN49715_c0_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_455365 |
| Sequence | GGTCGCCAAAAGCTCGGAAGCAGGTATAAGCATAATGCTCAAAATATTATTTGTGTGCTTAGCCATCCTTCATATTTATCTTCAAGCATCTGTGGAAGAT CCCAATGATATAGTGTTACAAAGGGCAGAATTCCTTTTTCTAGTAAAGCATCAATGAGGCTGTTATAATACATTATTCCCTCTGCATTAGGGTCCCCTGT TCCATTTGGGAATGGATTCTTACAGATTTTCCATATCTTGGACAAGAATTTTCCCAAATGGAACAGGGGACCCTAATGCAGAGGGAATAATGTATTATAA CAGCCTCATTGATGCTTTACTAGAAAAAGATGCTTGAAGATAAATATGAAGGATGGCTAAGCACACAAATAATAAAAGATTTTGAGCATTATGCTTATAC CTGCTTCCAAGCTTTTGGCGACCGAGTTAAGCACTGGATTACCTTCAATGAACCTCATAACTTTGCCATCCATGGTTATGATTTAGGCATTCAAGCACCA GGAAGATGTTCCCTTCTGGGCCATCTTATTTGTAAGAAGGGGAAATCGTCCACTGAACCATACATTGTTGCTCATAACATTCTCTTATCCCATGCTGCAG CCTATCGAAGTTACCAACTACATTTCAAGGAAAGACAAGGAGGCCAAATAGGGATAGCACTAGATGCCATTTGGTATGAGCCCATAACTGATCTTGATGA GGACAAAGATGCAGCAGCTAGAGCTAGAGATTTTTCACTTGGTTGGTAAGTGATAACCTTTCTTATTGCATAGTGATTATGACAAAGTTAATAGTTTTGT TAACCAAGTACTTATCTTCTATAGACAAAAACTGTAACGCAAATGTAAATCAGGTTCCTTGACCCGCTTTTCTTTGGAAAATATCCTATCTCAATGAAAA AACTTGTAGCAGAGAGATTACCAGAGATATCTTATGCAACCTCAAATTTGCTGGTGGGGTCATTGGATTTTATTGGCATAAATCACTATACCTCATTATA TACTCGTAACGATAGGACTCGGTCTCATAAACTGGTTATGCAAGATGCTTTGGCTGATGCTGCTGTCATCACAACCGGTAATCAGTTAACACAAATTGCG TGACCCCTTTTCAGTTCCTTTAATTTTCATCTTTGCCTTAAGCATAACAGAAGCCAAATAGAAGTTTATGATTTTCCTATTGTTCTTTACCTAGCATACC GGAGAGGAGCTGCAATTGGAGAAAAGGTATGCTTACAAACTTAGGCTACACTTTACATATACAATTTGTCAGTCCTCCTTTCTTTTCCAGAAAAAAAGTT GTCAAAATTTAATGTACAAAGTTGTTGAACAAATAACATGGCTGAATCAATAATTCTTCTTTTCCAGGCCGCCTCAAGTTGGTTGCACATTGTACCATGG GGTATAAGAGAGTTGGTAAAACATGTGAAGAGAAAATATGGGAACACCCCTATAATTATAACAGAAAATGGTAAGTTGTTTATGGATGGAAAGCTAATTA ACAACAAAATGAATTGAGAGAAAACAGAATTCTACTACCTTAATGTGTGAATTGTATAATTTCTATGTGCAAAATGATGATTGTAACAATGCTACTTTCT GATGGCAGGAATGGATGAAAAAAGCAAACCCTTTATGACCTTAGAAAACGCCTTAAAAGATGACAAGAGAATAATGTACCATAGGGACTATCTCTCAAAC TTATCTGCTGCTATAAGGTATTATTCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_171656; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_455365
| Blastp | Putative beta-glucosidase 41 from Arabidopsis with 77.54% of identity |
|---|---|
| Blastx | Beta-glucosidase 25 from Oryza sativa with 58.57% of identity |
| Eggnog | beta-glucosidase(COG2723) |
| Kegg | Link to kegg annotations (AT5G54570) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449369.1) |
| Pfam | Glycosyl hydrolase family 1 (PF00232.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |