Ll_transcript_453554

• Id Trinity: TRINITY_DN49720_c0_g1_i3
• Name Transcript: Ll_transcript_453554
• Sequence: AGACACATAAGCGTGGTTGTTGGATGTGTAATAAAAGGGTTTTGTTGAAACTAATTCAAATAACAAATTCTATTATTATCATTTCTTCTTCTTCTTATTC CCTTTCATTCATCGATTGAAGCACTAAATGGCTTTCTTCAAAACTTTCTCTGCAATTTCTCGTCTTCGCTCCACTCTCGGTCACCAATCTAATCTCACCA ATTCAGTTAGATGGCTCCAAACTCATACCTCCACTAACACTGATCTTTTTTCTGAGTTCAGGGAACTAATTCCACAGCATCAGGAGCGTGTCAAAAAGCT GAGGAAAGAACATGGGAATGTTGAATTGGGAAAGATAACGGTTGATATGGTACTTGGTGGAATGAGAGGAATGACAGCTTTACTTTGGCTAGGCTCGACT GTTGACCCAGATGAGGGAATTCGCTTTAGGAGCATGACAATTCCCGACTGCCAGAAAACACTTCCGGGTGCTTTTCCTGGTGGAGAGCCTTTGCCTGAAG CTGTACTGTGGTTGCTGTTGACAGGAAAGATACCAAGTAAAGAGCAAGTAGATTCATTAGCCCAGGAATTGCGAAGTCGTGCAACTATCCCAGATTATGC TTACAAGGCAATTGATGCACTGCCTGTACATGCTCATGCAATGACTCAGTTTACTACTGGTGTCATGGCCCTTCAGGTTCAGAGTGAGTTTCAAAAGGCA TATGAGGGTGGGATACCAAAAGCAAGATATTGGGAGCCAACTTATGAGGATAGCATGAATTTAATTGCTCGCTTGCCAGCAATTGCTGCTTATATTTATC GGAGGAAATACAAGGATGGAAAAATCATTCCAATGGATGATTCTTTAGATTATGGTGCAAACTATGCTCACATGTTAGGATTTGACGATCCGGAAATGCT GGAGTTTATGAGGCTGTATATTTCCATCCATAGTGACCATGAAGGTGGTAATGTTAGTTCTCACACAGCTCACCTAGTTGCTAGTCCACTATCAGATCCT TACCTTGCATTTGCGGCTGCTTTGAATGGTTTAGCTGGGCCACTGCACGGTTTGGCCAATCAGGAGGTTCTGAGATGGATCAGATCAATAGTTGCGGAGT TTGGAACTCCAGACATTAGTACAGAACAGTTGTCTGACTACATTCATAAAACATTGAATAGTGGCCAGGTTGTGCCTGGATATGGTCATGGGGTTTTGCG CAATACAGATCCAAGATACACATGCCAGAGGGAGTTTGCTTTGAAGCATTTGCCTAATGATCCACTTTTCCAGCTGGTGTCAAAAATTAAAGAGGTTGTG CCTCCCATTCTGACCAAGTTAGGCAAGGTTAAAAATCCTTGGCCTAATGTTGATGCTCACAGTGGAGTGCTTCTGAACTACTATGGTCTAACTGAGGAAA ACTATTATACTGTTCTCTTCGGTGTAGCGAGAAGTATTGGAGTTGGCCCTCAGCTGATATGGGACCGAGCGCTTGGACTGCCGCTTGAAAGGCCTAAAAG TGTGACGCTGGAGAAACTCGAGGCGTTGTGTGGCAAATCATCCTGAAACTTATAGCAACATGATGAATGTATTGCAGTGCTAAATTGAAATTTTCAGAAT GCACCATTGCTGTGAGGAATATAGTATTATTACCTCCCCATCTCATCAATGTGCATTGTCCTTCACTTGTTATAGAGTATTTACCCTCACCACTTGTCTT AACACTTTTCTTTTTGAGAACTGAGGAATCATCAAAATAAAGCCATTACTATTATTATTATTGAGGCTTATCTCCTTTTATTGTTTCTTAATGGGATTTA CACATAAAGTATATACCTATGATTTTGATGATAA
• Tissue: pods
• Gene name: LI_gene_171680;
• Additional information: details;

Expression of Ll_transcript_453554

FPKM

• PAB: 7.7
• PNAB: 31.9
• PS1: 24.1
• PS2: 17.6
• PS3: 25
• PW1: 22.3
• PW2: 18.9
• PW3: 13.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_453554

• Blastp: Citrate synthase, mitochondrial from Daucus sect. Daucus with 74% of identity
• Blastx: Citrate synthase, mitochondrial from Citrus with 73.09% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425378.1)
• Pfam: Citrate synthase, C-terminal domain (PF00285.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;