| Id Trinity | TRINITY_DN49723_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_455101 |
| Sequence | CTCCAAAACATAACACCCTCTTTTCTTCTTCTCCCTCGAGAATCAAGAACTACCATCACCAATGTCGCAGCAACAAGGTCAAATTCCGATAAACCCCTTG ATTCCACAGCAGAATTCAATCTCACAACAAATCCCTATTCAATACCAATACCCAATGCATATGCAAATGCAATACCCTATGCAGATGCACGTGCCCTATC ACATCCCATTCCAGATTCCATACTCCGTCCAAGACGCCGCCGTCACCGCCGCTGGTTCCACCGGATATCCAATCTCATCTGCTAAGCGCCGCCGTGAGGA CGAGGCCCTGGGAACCGATTCAGCGGCGGAGCTGTCGGCGGCGAAGCGTGTTAAAGGCCAGGATGTGATATTTAGGATCATTGTGCCGGCGCGGCAGATC GGGAAGGTGATTGGGAAGGAAGGTTGCCGGATTCAGAGGATCCGGGAATCGACCAGAGCCACCATCAAAATCGCCGATGCTATTGCTAGACATGAAGAGC GCGTTATCATTATTAGCTCTAAAGACAACGATGAAAAGATTACTGATGCAGAGAAAGCTCTAGAGCAAATAGCCAATTTAATTTTGAAGGAAGATGATAG CAGTCTTGATGCATCAAAAGTTACTGCAGGGCATGTTGCTGCCAATACAATAAGACTTTTGATTGCTGGAACTCAGGCAGGTGGATTGATTGGGATGTCT GGTCAAAACATAGAGAAGTTGAGGAACTCCTCTGGTGCCTCAGTTACAGTTCTTGCACCGAATCAGTTACCTTTATGTGCTTCCGCTCATGAATCTGATA GAGTAGTACAGTTATCAGGAGATCTTCCTGCAGTAATGAAGGCTTTGGAAGAGATAGGTTATCAGTTAAGGGAAAACCCCCCAAGACAAGTGATTTCAAT TAGCCCAACTTACAATTATGCTGCAATCCGGCCATCCCAACCATATCTTGATCCATCTTCAGGACAACCAATCTTGCAGTTGACTATGTTACATTCGAGA TGCTGATTTCGGAAACAATGGTTGGGGGGTTGATCGGCAGATGTGGCGCGAACATATCAAGGATCAGAAATGAGTCTGGAGCAATGATCAAGGTTTATGG TGGAAAAGGTGAACAAAAGCATAGGCAAATTCAATTTGGTGGTAGTGCCGAACAGGTAGCATTGGCAAAACAGAGAGTTGATGAATATATATACTCTCAG TTAATACAACAAACTGGTCCCCAAGAATCAGGGTAGCATTGGTAAAACAGAGAGTTGGTGGATATATAGACTCTCAGTTGTTACTACAAGCTGGCACCCA ATAATTAGGTGAAGGGTTTTATGTTATGAATTTGGTAAATTGAAAATGTAACAGTTTTTTATAGTATTAACAATCAAGGACCATGCACATCTTGTAATAA TTTGTTAATAACTAAGGTTCTTCACTTTCTGTATAAGATTTAACATATTCTGAGTTAGTATTTTGATGGTTCAATGATAGTGGAATATTGTTTACTCTGT AATGATTATAATTGTGACATTTTAAATGTTTTTATACAGTTGCTTTAGTGTGAGATTACATAAATTTGAAATGTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_171712; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_455101
| Blastp | RNA-binding KH domain-containing protein PEPPER from Arabidopsis with 35.48% of identity |
|---|---|
| Blastx | RNA-binding KH domain-containing protein PEPPER from Arabidopsis with 34.41% of identity |
| Eggnog | mRNA transport(ENOG410XNN8) |
| Kegg | Link to kegg annotations (AT4G26000) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434259.1) |
| Pfam | KH domain (PF00013.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |