Ll_transcript_455104

• Id Trinity: TRINITY_DN49723_c4_g1_i4
• Name Transcript: Ll_transcript_455104
• Sequence: CTCCAAAACATAACACCCTCTTTTCTTCTTCTCCCTCGAGAATCAAGAACTACCATCACCAATGTCGCAGCAACAAGGTCAAATTCCGATAAACCCCTTG ATTCCACAGCAGAATTCAATCTCACAACAAATCCCTATTCAATACCAATACCCAATGCATATGCAAATGCAATACCCTATGCAGATGCACGTGCCCTATC ACATCCCATTCCAGATTCCATACTCCGTCCAAGACGCCGCCGTCACCGCCGCTGGTTCCACCGGATATCCAATCTCATCTGCTAAGCGCCGCCGTGAGGA CGAGGCCCTGGGAACCGATTCAGCGGCGGAGCTGTCGGCGGCGAAGCGTGTTAAAGGCCAGGATGTGATATTTAGGATCATTGTGCCGGCGCGGCAGATC GGGAAGGTGATTGGGAAGGAAGGTTGCCGGATTCAGAGGATCCGGGAATCGACCAGAGCCACCATCAAAATCGCCGATGCTATTGCTAGACATGAAGAGC GCGTTATCATTATTAGCTCTAAAGACAACGATGAAAAGATTACTGATGCAGAGAAAGCTCTAGAGCAAATAGCCAATTTAATTTTGAAGGAAGATGATAG CAGTCTTGATGCATCAAAAGTTACTGCAGGGCATGTTGCTGCCAATACAATAAGACTTTTGATTGCTGGAACTCAGGCAGGTGGATTGATTGGGATGTCT GGTCAAAACATAGAGAAGTTGAGGAACTCCTCTGGTGCCTCAGTTACAGTTCTTGCACCGAATCAGTTACCTTTATGTGCTTCCGCTCATGAATCTGATA GAGTAGTACAGTTATCAGGAGATCTTCCTGCAGTAATGAAGGCTTTGGAAGAGATAGGTTATCAGTTAAGGGAAAACCCCCCAAGACAAGTGATTTCAAT TAGCCCAACTTACAATTATGCTGCAATCCGGCCATCCCAACCATATCTTGATCCATCTTCAGGTTATTTAATGTTTTCTATATTAGAGCAACTTTTTGCT GCCATTTAGAAGTTATATTAAGTTTTGAATATTGTCTTACAACCACTTCATCTCTAGGACAACCAATCTTGCAGTTGACTATGTTACATTCGAGATGCTG ATTTCGGAAACAATGGTTGGGGGGTTGATCGGCAGATGTGGCGCGAACATATCAAGGATCAGAAATGAGTCTGGAGCAATGATCAAGGTTTATGGTGGAA AAGGTGAACAAAAGCATAGGCAAATTCAATTTGGTGGTAGTGCCGAACAGGTAGCATTGGCAAAACAGAGAGTTGATGAATATATATACTCTCAGTTAAT ACAACAAACTGGTCCCCAAGAATCAGGGTAGCATTGGTAAAACAGAGAGTTGGTGGATATATAGACTCTCAGTTGTTACTACAAGCTGGCACCCAATAAT TAGGTGAAGGGTTTTATGTTATGAATTTGGTAAATTGAAAATGTAACAGTTTTTTATAGTATTAACAATCAAGGACCATGCACATCTTGTAATAATTTGT TAATAACTAAGGTTCTTCACTTTCTGTATAAGATTTAACATATTCTGAGTTAGTATTTTGATGGTTCAATGATAGTGGAATATTGTTTACTCTGTAATGA TTATAATTGTGACATTTTAAATGTTTTTATACAGTTGCTTTAGTGTGAGATTACATAAATTTGAAATGTAG
• Tissue: pods
• Gene name: LI_gene_171712;
• Additional information: details;

Expression of Ll_transcript_455104

FPKM

• PAB: 0.4
• PNAB: 0.5
• PS1: 0.2
• PS2: 0.2
• PS3: 0
• PW1: 0.1
• PW2: 0.6
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_455104

• Blastp: RNA-binding KH domain-containing protein PEPPER from Arabidopsis with 34.41% of identity
• Blastx: RNA-binding KH domain-containing protein PEPPER from Arabidopsis with 34.41% of identity
• Eggnog: mRNA transport(ENOG410XNN8)
• Kegg: Link to kegg annotations (AT4G26000)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434261.1)
• Pfam: KH domain (PF00013.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;