Ll_transcript_455106

• Id Trinity: TRINITY_DN49723_c5_g1_i2
• Name Transcript: Ll_transcript_455106
• Sequence: CAATCATAGAAGATTCAAATTCTTCCCTCAAACTCAAATCCATACAATCCCCTTTATTGATATCTAGAACGGGTGGTTAACGTTTTTGGGTTAAAAGTTT TATTTTTTCTTCAAATCAAAGCCACGTGTCATGATCTGCACCATCTCGTTAATCCAACAGCTCACAAAGGTGTCAGACACATTTTCAGTTTTTCTAAACC CTGTTAAGAACCTCGTCATTTCGGTCTTGTTTTTCACTCTTCCTCCGCCGTCACGAGGTCCGTCGCAGGTTGCACCACCGTGAGCTATATCGTCTGTTGT TACGGTCCCAGACCAAACCACGTCGCAGGTTATTGCAGCTAAAAGGTTAAATACAAGGAATTCACTATCAAACCCTTCGATATTATGGAGACTGAAGCTG ACTCGGGAAATGGCTCTATTGTTCTAATCAAGCAAGGGGCTGAAGCTGTAAGTGTGATCGCTCCCTGGATTTGTAGAAGCAATTGACACCTACCTTTTAT GTATATTTCAATATTTTATTGTCTTGTTGGCACACCATCTTGTAAGTGTAATTACTTAAGGATTTTAGAAGCATTTAATTGCTATCCTTCAGGTAAGGTT TCAAACTTTTCTTCTTTGTGTGTTCTACCAATCCCGTTGGATAATTTTGTATATGATAAAATCAGACTCACCTTGCCTTTTTGTTGTGTTGTGTGGTTAG AGGAAATTGGTCCTGCAATAGTTGCAATTTCTTATGCCCATTTTGATGTTACTTTTATAGAGGGTTTTTGAATCTTCTTTTGTGGGGAGGAGATCTGTTA TCAAGGAACGCTTCTCAAAGAAATACCGGCATCCAACGTTGGATTCTAAACTGACCATCAAGCGCTTGAATGCGGTCAGATTTGACAAAAATTTCCTGAT GAAGTTTTATATATCTAGAAATATTTTATTCATTGTCTTGAATGCTTTTTGTCCACCAATCGTTTGTTGGAGCAGGAGGCCAGGTGCATGACCAAAGCAA GGCGACTTGGGGTTCAAACTCCAGTGCTTTATGCCGTGGATCCTGTATTGCACACTTTAACATTTGAATATGTTGAGGGCTCTTCAGTGAAAGATGTATT TCTTGAATTTGGGTCCCGCAGTGACGTTGAGGAGCAGCTGAGTAATATTGCTTCTCAAATTGGTGAGGCAATTGGAAAGTTACATGATGGTGGTCTTGTT CATGGTGATTTAACGACATCAAATATGTTACTAAGGAATGATACCAATCAGTTGGTCCTCATTGACTTTGGTTTGAGCTTTACTTCAACTCTACCTGAGG ATAAAGCTGTTGATTTGTATGTTCTGGAAAGAGCTCTTCTTTCAATGCATTCTTCTTGTGGGAATGTGATGGATCGGATACTTGCTGCTTACCGCAAGTC ATCAAAACAGTGGTCATCCACATGGAACAAGCTGGGTCAAGTGCGACAAAGAGGGCGAAAGAGGACCATGGTTGGATGATTCTTTCTCTAATTTTTACTT CATTGTTGTGGAGAAATTGTGGTACAAAGAAAGAGATGTAGACTAATGAATGTTAGTAATGTAAGCTGTTTTTATATTCTCTTTATATATTTGTAATATG CACATCTGTTATGGCTTAAAAAAATTAATGACTTAATAACTTTTGTATGCTAAGGCTTTAAAAAAATCTACTTTTTCTAGTTAGGCAATTCATATCTCAA TCTATGTTATGGATGTTGTTCACTGTTTCTTGAATTAATGTTAACTAGTTGGAAATTTCCAGAATTCTTGTTATGCTTAAATCATGTTTGG
• Tissue: pods
• Gene name: LI_gene_171713;
• Additional information: details;

Expression of Ll_transcript_455106

FPKM

• PAB: 0.2
• PNAB: 0.8
• PS1: 0.7
• PS2: 0.6
• PS3: 0.3
• PW1: 0.4
• PW2: 0.6
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_455106

• Blastp: TP53-regulating kinase from Homo with 48.19% of identity
• Blastx: EKC/KEOPS complex subunit bud32 from Dictyostelium with 44.32% of identity
• Eggnog: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (By similarity)(COG3642)
• Kegg: Link to kegg annotations (112858)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417970.1)
• Pfam: RIO1 family (PF01163.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;