Ll_transcript_455150

Id TrinityTRINITY_DN49725_c0_g1_i3
Name TranscriptLl_transcript_455150
SequenceGTGTACAGTTTTTTTTTATTTTATAATTTATAGTGGCGATTATAGAAAATAAGAATCACTATTTAGTCATGAAGTTCCAAGTAGGAAATTTGATATTAAT GCCTCTGCTTCATTTTTGTTGTGTATTTTTTTTTTTGTTTTCTCTAAGGAGAAGGTTAATTCTCCTTTTTTTTTTGTACTGTTTCCTTCTTTCCAATGAA TTTCTTCTTTTGCCCTAATTCCAAAAAGAAAAGGGTAGAAGTTATTAAAAATAAAAACCTGATATTCCTTCTTACTATACATTTCATATATGCCTGAGCT GATTTACAGGAGTTAGATCAAGTGAATAGCATATCTCTAGCTGACACAGCATCAGTTCCCCCGTCTAGAAATGATCTGATCAGTACTTCAGAGCAAGTTT TGGTCTCAGATACTCCATTACATTCATCTCCAGCACAGTTACAGTCCCTTAGGTCTTTCGATTGGATAATTTCTGAGGTGCAATTTTCTTTTCAATACCT TACGAAAAGGAGAGATAAGAGGCTTTCTTCATTGCCATCTAGTAAGCATAGATGTGGAAAAGCTGATGTCAAAAGCTGCTATACAGCTGCAACTCTGAAG CTTTCACAACTGGAAACTGAAGAACAGAAAGAAAAGGCTTTAGCTTTAGCAACTACTGAACTGGAAAAACTTTTCAAGAAGGAATACTTCAGAAGCATGA AGGTGATTGGGCAATTCAATCTTGGATTTATCATTGGTAAATTGGATCAAGACTTATTCATCGTAGATCAGCATGCTGCTGATGAGAAGTACAATTTTGA ACGTCTATCACAATCAACCATCTTAAACCAACAGCCTTTGTTTAGGCCACTAAGAATGGAGCTATCCCTTGAAGAAGAAATAGTTGCTTCAATGCACATG GATATAATCAGTACACAAATGTTGCTGAAGCTTTGTCTTTTACTTCTTCATTTAATTAACTGGGTTGTCAGAATGAACTGCCAGATGCTTGTCTTCTGCT TATTGGTACACCAATATTGCTTGATCTGGTCCCTCTTGCATTGCCGGTTGCTTTTGTCTATGGAAATTTCATTGAAATTGAATATATTGTTTTAGTTATG AAATTTAATTAATTTTTCGTCCCATCCCTGTGTCTTTAAGGTTTTAGTGACATGCATTTCCATTGTATCAATTTTTTCAGGAAGAATGGATTTACTTTGG AAGAGGATCCAAATGCACCGCCTGGATGCCGTTATAAGTTAACATCTGTCCCCTTCAGTAAAAACATAATGTTTGGAGTTGAAGATGTTAAGGAGCTGAT CTCTACCCTGTCTGATGAGCATGGGGAATGTTCCATTATTGGTAGTTATAAATTGGATACCTCAGGCTCTATTTGCCCTTCGAGAGTTCGTGCAATGTTG GCTTCCCGTGCATGTCAATCATCAACTATGGTTGGTGATCCACTTGATAGAAATGAAATGCAGAAGATAGTGGAGCATTTGGCTGAACTAAAATCACCAT GGAATTGTCCCCATGGCAGGCCAACCATGCGCCATCTAATTGACTTGACTACAATTCATAAGAGCTCAGAACTAACAATGTAGAGATGTAGATTCGTTAT GAACTTTTGATCTAATTGCCATTGGAACAGTAAGTAACTCTGTAACTTATTTTGTACAATTACTGTGTCCGAAGTGTTGGTCTTGAAAGAGTATGCTTGG TGCAATAGTGCTGAGCTTCTTATTGGGCAGTCTTACCTCTTGACATTGTGTTCATTTGCTAATGGTGTCTTTTTAAATGCTTTACCATTTGAGTCAACAT ATCATTTGTACTAAAATAATTTGAAGTATAATAAAAGGGGAGAAACATATGAATCTATATATGATAATTAATTGAGTATAATGATCTTAACTATTCAACA TCTTCAATGATTTAGATTGATGTTCATTATGCAAAAATGAGGAACTCAACCCAGTAAAAATTTAAAACATTCAGTTTCAAAAAAGTACCAACATTAATTC TCAAATTTTAGTGAGCCAGCTATAAGTACTCTAAAATTGCTGATAGATTCACAACAACAGGAAAGTTTTTTTCTATTAATTACAAAGGCAGTCGAATTCT CAAAAAATCTAATGTCTAAGTGACCCAGGGGATATCCAACAATTGTACTACTGGAAAACAAATAAGCTTTTTAAAAATTGAATTAAATGAATATCTACTC TGAAATATTCAGCAATATTTTTAAATAAGATTTTGTAAATTAATTATGACATTTTTTAATCATGTTAAAAAATGTAAAAAAGAAAATGCAGGTCGAGGAG GCTTCATAGCGCCTTAGTAGTAATGATATATAAAAAAATAAAAAATGAGAAGAGAAAGTGACTCCACACTTCACAACTTAGTTGAGTGAGTTTCCAATAG CACTTCATAGATTGTTCGAAAGCATTGAAAATTATTAGGTTAGGTTTGAATCATTGTATTTAAATTATAGAAGAAAAGAACGAGAACAACACAATAGCGA TCAACCTCTCTCTCTTCACAATAAAACGATTTACGTAATCACACAGCATTTCCACTTCAACCTTCGATTTACAACATGTTGCCCCTTTCTCTTCTCAAAA CTGCCCAAGGGCATCCAATGTTGGTGGAACTGAAAAATGGTGAGACTTATAATGGGCATTTGGTTAATTGTGATACATGGATGAACATCCATCTCAGAGA AGTTATATGCACCTCTAAAGATGGAGATAGATTTTGGCGTATGCCTGAATGCTACATTCGTGGCAACACGATTAAGTACCTTCGAGTTCCTGATGAGGTT ATTGACAAAGTTCAGGAGGAATCCAAGAGCCGCACCGATCGCAAACCTCCTGGTGTGGGACGTGGAAGGGGAAGAGGAGGTAGCCAGGATGGTCCTGGTG GACGTCCAGCAAAAGGAATTGGGCGTGGTGTTGACGAAGGCGGGGCTAGAGGGCAAGGAGGAAGCCGAGGAGGAAGGGGTGGCATAGGTGGAAAGCCTGG TGGAAACAGAGGTAAATCACCCCCTTCATTATTCCAAAATTCGTTCACTGCATGCATGTATACCAACTGTTAGTTTTTCGGCTTATAACAATCGATATGA ATATTTTGGCTTCCATCTCTCAAATTTCTTATGAAGGAGTTCAAAGTAGTCCATGCTATTTTCATTTATTTTGCCTGGATGAGCTCCTGATGAATTCATC AATGTAAAAAGTAAATTATTACTAAAGGAACTCAATGTCTTATGTTCCCTTGTTTTGATGTTTAAGGGGAAAACGGGTATGGGAGTTTGAGTTATAGTAG AGAGAAGGTATATGTTAGTAAGTTAAATCCCAATGTAGTTCAACTTTGTGTTGGAATCCTATATCACTTACCTGAGGGTATTATACGCGATCCAATGAAT AGCTAATATAAAATAAATCATGTCCCCATTCTTCCATCCCTTCCAACATGTTACGTAGCATACATCGTGTGAATGAATCTCGTTCAATATTTTTGCTTAT TCTGATAGCTGCAGGGCGAGGCAGGGGTTGATTTGAGTAAGTGATGTTGGAACTACTGCAGTTTGATGAGTTGCTACTTTTAGAGCCATTGGTGCTCGTT CATCAAATTTGGCCGATTCTGTTTCCTGTGCATACTTGGATTTTATTTTTTCGATGTTTTTCTTGCGCTCGTGGTCTCGAAAATGGCGATATTATAGAAT TTACAAAAGCTTCTATTCAGACAATATTTTATAATGCCTTCTCTATGGTAAACTTGCTTTTGTGTGTTAGTTATTGAATAGCTCCAAACTTGCTATGGTT GGAAATGCTCCTTCCCAAAATTGAATTCATGTTCCAGTAATTTTGAAGGCATAGAATATGATATTATTCATTTTGTCATGTTCTATCTTTATTCTTGCCA CTGCTGAAGCCTGAACTAATAGAAAAAATAATTTGCTTAGCATGCCTTAAATTTAGGCTATTTGTACTCGATTTTGTGTATTGGCGCTCTCTTACTTACT GCAAACTTTGATTTGCTGAAGTGCGCTTTATTGATTGATATTTTTAATAACATAAATTTCTTTTTTATTGTTTGTAGTGACCTATTTACTCAGTTTTATT ATATCTAACAATTTTACAAAAGGAATTG BLAST
Tissuepods
Gene nameLI_gene_171738; 
Additional informationdetails; 

Expression of Ll_transcript_455150

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_455150
BlastpProbable U6 snRNA-associated Sm-like protein LSm4 from Nicotiana with 89.26% of identity
BlastxProbable U6 snRNA-associated Sm-like protein LSm4 from Nicotiana with 89.26% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019441764.1)
PfamLSM domain (PF01423.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;