| Id Trinity | TRINITY_DN49730_c0_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_455975 |
| Sequence | GGAACATTTTCCATTTATTTTCCGTCCATTTTGTTTTGGATTCTGTGCTAAGGGCCTAAGATCTTGTCTTCACTTTCAAAGTTTTCTCTCCTGCTAGCTG AACAGTAATGGAGAGTAGCGAGGAAGAAGATGAATTCCCTTCCATTGAGAGCATCATTCCCCAATCCAAAGTTGATTCTCTCTATCAGTCTCACACTGAA AAGGGCATTAGAAGGCTTTGCTGTGAGCTCTTAGATTTGAAGGATGCTGTGGAGAACTTATGTGGTAATATGCAGTCAAAGTTCTTGGCTTTTTTGAGGA TTTCTGAGGAGGCTGTGGAAGTAAAGCATGAATTGATTGAGCTGCAAAAGCACATCTCAGCTCAAGGCATCCTTGTACAGGATTTAATGACTGGTGTTTG TCATGAGTTGGAAGAGTGGAATCAGTCAAACAAAGATGTTACTGAAATTGAACTTGAACCTGAAATATCTGAACTCCTTGAGCCCTTATCAAACGAGATA AATGAGAAGAAAACAGTTTTCTTGGAAAACATTGATGTACTTGTGTCTGAGCATAAGTTTGAACAAGCATTAGAGGCATTAGATGCTGAAGAAAGAAGTT ATGATATGTTGAAAGGCACAGGGAATATCTCTTCAGATGAAGTTTCCTCATACGAGTCTGCTTTATTGGAAAGAAAAGCGGTCCTTGAAGACCAGTTAGC TGGAATTGCCGAACAACCTTCTGTTAGTTATCCTGAGCTTAAGAAGGCCTTAAATGGTTTAATGAAGCTTGGAAAAGGTCCTCGAGCACATCAATTACTG CTGAAATTTTATGGGTCTCACCTCCAAAAGAGAATTGAGGCTTTGCTTCCCTCAAGTTCTCTTTGTCCTGAAATATTTCCCTCTACATTATCTAAGATTG TGTTTTCTGTAATATCACTAACAACAAAGGAATCTGCTTTAATTTTTGGAGATAATCCTATTTATACCAATAGAATAGTTCAGTGGGCAGAGTGGGAAAT TGAATATTTTTTACGATTGGTGAAGGAGAGGGCACCATCATCAGAGACTGTTTCTGCCTTACGTGCTGCTAGCATCTGCATTCAGGTTAGTCTGAACCAC TGCTCAATCTTGGAGACACAGGGATTGAAAATGTATAAATTATTGTTGGTGCTATTGCGTACATATGTTGAAGAAGTTTTAGAATCAAACTTCAGGCGTG CTAGAAGAGTAGTTCTTGACATGGCAGAATCTGTTGAAGGCTTCCCATTGTCACCACAGTTTGCATCTTCACTTTCTGCTATTACAACTTCATCAAATAG CATGCTTGTTGAGAGTGGAATGCAATTTATGTGCATCGTTGAAGAGATATTGGAACAACTAACACCATTAGCTAGTTTGCACTTCGGAGGAAGTGTTCTA AGTAGAATTTCTCAGTTATTTGATAATTACATGGATGTTCTCATCAAAGCGCTACCAGGTCCTTCTGACGATGATATCCTTCCAGAGCTAAAAGAGGCTG TGCCTTTCAGAGCTGAGACAGACTCAGAACAACTTGCAATATTAGGCATAGCATTTATCATATTGGATGAACTGTTACCAAATGCTATATTATCAACATG GATGCAGCAAAGTGAAAGCAAAGAACCAAATAGTGGAATCAAGGAAAATGTGCTCAATGCAAATTCTAGTGTTGAATTAAAGGAGTGGAGAAAACATCTT CAACACTGTTTTGATAAACTCCGAGATCACTTCTGTCGGCAGTATGTTCTGAATTTCATCTATTCGAGAGAGGGGAAAACAAGTTTGAATGCACATATTT ACTTGAATGATAGCAGAGATGATCTTTACTGGGATTCTCACCCTCTGCCTTCGCTTCCATTTCAGGCATTATTTTCAAATCTGCAGCAATTAGCAACTGT GGCTGGAGATGTATTACTTGGGAAAGATAAAATACAGAAAATTTTGCTTGCTAGGTTAACAGAGACTGTTGTTATGTGGTTGTCTGATGAGCAAGAGTTC TGGGGTGTATTAGAGGATACTTCAGCTCCTCTACAACCACTTGGTTTACAGCAGTTAATTCTTGATATGCATTTTATTGTTGAAATTGCACGCTATGCGG GATATCCATCTCGACATGTTCATCAGATATCGTCTGCTATTATTGCTCGTGCGATCAGGACCTTCTCTGCTAGGGGTATAGACCCACAAAGTGCACTTCC TGAGGATGAATGGTTTGTCGAAGCTGCAAAGTCAGCAATAAACAAGTTTTTGCTTGGGGCATCAGGATCGGAGACATCCGATATTGATGTAGATGACGTC ATTGTTCACGATGAAGTTGTCTCAGATTCAGATACTGTTTCATCCCTGTCCACAATGGACTCTAATGAGTCTTTTGCTTCTGCTAGCATGGCAGAACTTG ACAGCCCCTCTTATTTGTCTGATTAAGATAATTGCATTTTTATACTAGCCTTAAAAAGCTGTTGAGTGAGAGTAGAAGTATCACTAACGATATTAATCTG TATATTATGAAAGGTAGTTAAGTTGGTTTGAGCCTCTTTGCTCTTGACCTGTTTTTTGTATCATGGTTTAGTTTATAATTTTTTGGTAATGTTTTGCTGA CATTATTTTCATTCTGAGACCCTCATCATTGGGGAATCATTTTGGACTCTTGAAAAGCCCATTTAAGAGAATAAAGCCATGTTTATCTATCTTTGTAGTT CACAAAACTAAACCGAGACGTTGCTTAAAGGAAATTGAAATTCTTATTGATGTTCTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_171771; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_455975
| Blastp | Exocyst complex component EXO84C from Arabidopsis with 61.3% of identity |
|---|---|
| Blastx | Exocyst complex component EXO84C from Arabidopsis with 60.54% of identity |
| Eggnog | Exocyst complex component(ENOG410XT7U) |
| Kegg | Link to kegg annotations (AT1G10180) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424047.1) |
| Pfam | Exocyst component 84 C-terminal (PF16528.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |