Ll_transcript_454340

• Id Trinity: TRINITY_DN49736_c0_g3_i1
• Name Transcript: Ll_transcript_454340
• Sequence: CTTTTTTGTTTCCTCTCATCACATGCTCCAACCTCTCTATCACACTCTGTCGCTCTATTTTTCATTTTATTTATCCTTTTTTTATTTTATTTATCTCTTT CACAAAGAAACGTGTCGGATAATATTTCTGAATCTTCTTCCTTCTTTCCATGTTATTCTGACACAGTGACATTCTCTCTTCGATCTCTCAAACTTGTCTC TTTCTTTTTCCTCAAAAAAGATGGACCGAAGGAATTGGCTGTGGCGCAGGAAATCATCCGAAAGAAGTCCGGGTGAAACTGAGAGTACTGGATCAGTATC ATCCCTTTCCGAAAGGTTATCTGATGATCAGGTATATCCAATCCAAGCTGCTCTATCACCAGAAGTCACATCTAAGGTTGCACTGAATGAAGAACCTGTT GCTGATGTGAAGATTCTAACAGACAAATTAGCAGCTGCTATACGAAATATCAGAGCCAAAGAAGACTTGGTAAAGCAGCATTCAAAATTTGCTGAAGAAG CTGTCACTGGCTGGGAGAAAGCTGAAAATGAAGTGTCAGCTTTAAGACAGCAACTTGATGCTGCAAAGCAGAAGAACACAATTCTCGAGGACCGACTTGG TCAACTTGATGGGGCACTCAAAGAGTGCATGAGGCAGCTTCGACAAGCTAGAGAAGACCAAGAGCAAAAGATTCATGAAGCTGTTGCAAATAATTCTCAT GATTGGGAATCCAAAAAATCGGAGCTTGAGGGTAAAGTTGCTAAGCTTGAGGCCCAACTTCAAACAGCTAAATCAGATACCGCTGCACCAGTGCTTTCTG ATCTTCGCAAGAGACTTGAGGCTGTCGAGAAAGAGAATTCAGTTCTTAAAATTGAGCTACAATCTCGACTCGAGGAACTAGAACTCAGGATTGCTGAGAG GGATTTGAGTACCCAAGCTGCTGAAACAGCAAGCAAGCAACATTTGGAGAGCATCAAGAAGGTTGCTAAGCTTGAAGCTGAGTGCCGTAGACTGAAAGCC TTAGCTCGCAAACCATTCTCTGTTAATGATCAGAGGTCTTTGACTGCCTCTTCTGTTTATGTCGAGTCCTTCACAGATAGCATGTCAGATAGTGGAGATA GGCTAGTGATAGTTGGAAGTGAGCCAAGCCGTTCTAACTCATCAATATCTGCTTTAGTTGCGGAACTTGATCAATTTAAGAATGAAAAGGCTACTAGAAA AAATCATACAGTCCATTCAACTAAGGTCAATCTCATGGATGATTTCCTTGAGATGGAAAGACTTGCTGCGTTGCCAGATATGGAAACTGGAAATAATTTT GTTGAAGTTGGAGTAGCATCGGACAAACTTAATGTTGGCCAGGGTACAATGAAAGCTGAAATTGAAGCTGCAGTTCAAAAGAATGTTGAATTGGAAAAGA AGCTGGAGAAAATGGAGGCAGATAGATATGAGGTAGAGATGAGTTTAGCAGAGTGTCAAATGCAGCTTGAGGCATCACAAAGTCGGATAAGGGAAGCAGA TTTGAAGGTCACAGAGCTTCAAACTCAGCTAGCCCTTGCAAAGAAGTCAAATGAAGAAGCGAATGAAAAAATAAAAGCTACCAAAACAAAGAAAGAGACA GCTGAATCAAAACTCAGACTTGCTCAAACTGAGGTAAAAGAATTGGTTTCAAAAATCAGTTCATTGGAGAAAGAGGTTCGACAGGAGCGAGCTTTATCTG CTGAGAAATTGAGCAAGTGCGGGGAGTTGGAGAATGAGCTTTTGTCAATGAAGCGTGAGGCTCAACTTCAGCAAGACGCTGAGATATTGCGTAGAGAAAG CGCCAAAAGCGAGTTGAAGTTAAAGCAGGACAAGGAACTTGCATTGGCTGCAAGTAAATTCGCCGAGTGCCAGAAAACCATTGCATCTCTTGGACAAAAA CTAAAGTCCCTTACAGCATTGGAAGATTTCTTACTTGATTCAGACACCCATATAGACTTAACAAGTGAAGTTACACAAGGTCCTCAAAATGGTGGTGCAC ACTTGAAATTGCAGCATAGTAATTTGAGTTTGCCCAAAAAAGATCCTGAGTCACAATTTGCACTAAAATCATGTGTTACACATCAGAAAAGCCGGAATAA TAGTTATGGTAATGTGATTCCTAGGAGTAAGAGTGTAAGCAGGACAAGAAGACAGTGAGAATTATTGGAGAGAAGATTGAGTTGTAAATTTGGGTTGTTC ATTCTTATCTCCTGGATTCAACACATATACATATATACATACATATATATATATATATATATATA
• Tissue: pods
• Gene name: LI_gene_171797;
• Additional information: details;

Expression of Ll_transcript_454340

FPKM

• PAB: 0.3
• PNAB: 8.8
• PS1: 8
• PS2: 6.4
• PS3: 11.2
• PW1: 6.3
• PW2: 6.9
• PW3: 7.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454340

• Blastp: Filament-like plant protein 3 from Arabidopsis with 43.71% of identity
• Blastx: Filament-like plant protein from Lycopersicon with 44.67% of identity
• Eggnog: filament-like plant protein(ENOG410YAAZ)
• Kegg: Link to kegg annotations (AT3G05270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458537.1)
• Pfam: Filament-like plant protein, long coiled-coil (PF05911.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;