Id Trinity | TRINITY_DN49736_c0_g3_i3 |
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Name Transcript | Ll_transcript_454344 |
Sequence | CTTTTTTGTTTCCTCTCATCACATGCTCCAACCTCTCTATCACACTCTGTCGCTCTATTTTTCATTTTATTTATCCTTTTTTTATTTTATTTATCTCTTT CACAAAGAAACGTGTCGGATAATATTTCTGAATCTTCTTCCTTCTTTCCATGTTATTCTGACACAGTGACATTCTCTCTTCGATCTCTCAAACTTGTCTC TTTCTTTTTCCTCAAAAAAGACAGAGTCATGATTTTGCTGCTTATAAACTATATTGTAGATGGACCGAAGGAATTGGCTGTGGCGCAGGAAATCATCCGA AAGAAGTCCGGGTGAAACTGAGAGTACTGGATCAGTATCATCCCTTTCCGAAAGGTTATCTGATGATCAGGTATATCCAATCCAAGCTGCTCTATCACCA GAAGTCACATCTAAGGTTGCACTGAATGAAGAACCTGTTGCTGATGTGAAGATTCTAACAGACAAATTAGCAGCTGCTATACGAAATATCAGAGCCAAAG AAGACTTGGTAAAGCAGCATTCAAAATTTGCTGAAGAAGCTGTCACTGGCTGGGAGAAAGCTGAAAATGAAGTGTCAGCTTTAAGACAGCAACTTGATGC TGCAAAGCAGAAGAACACAATTCTCGAGGACCGACTTGGTCAACTTGATGGGGCACTCAAAGAGTGCATGAGGCAGCTTCGACAAGCTAGAGAAGACCAA GAGCAAAAGATTCATGAAGCTGTTGCAAATAATTCTCATGATTGGGAATCCAAAAAATCGGAGCTTGAGGGTAAAGTTGCTAAGCTTGAGGCCCAACTTC AAACAGCTAAATCAGATACCGCTGCACCAGTGCTTTCTGATCTTCGCAAGAGACTTGAGGCTGTCGAGAAAGAGAATTCAGTTCTTAAAATTGAGCTACA ATCTCGACTCGAGGAACTAGAACTCAGGATTGCTGAGAGGGATTTGAGTACCCAAGCTGCTGAAACAGCAAGCAAGCAACATTTGGAGAGCATCAAGAAG GTTGCTAAGCTTGAAGCTGAGTGCCGTAGACTGAAAGCCTTAGCTCGCAAACCATTCTCTGTTAATGATCAGAGGTCTTTGACTGCCTCTTCTGTTTATG TCGAGTCCTTCACAGATAGCATGTCAGATAGTGGAGATAGGCTAGTGATAGTTGGAAGTGAGCCAAGCCGTTCTAACTCATCAATATCTGCTTTAGTTGC GGAACTTGATCAATTTAAGAATGAAAAGGCTACTAGAAAAAATCATACAGTCCATTCAACTAAGGTCAATCTCATGGATGATTTCCTTGAGATGGAAAGA CTTGCTGCGTTGCCAGATATGGAAACTGGAAATAATTTTGTTGAAGTTGGAGTAGCATCGGACAAACTTAATGTTGGCCAGGGTACAATGAAAGCTGAAA TTGAAGCTGCAGTTCAAAAGAATGTTGAATTGGAAAAGAAGCTGGAGAAAATGGAGGCAGATAGATATGAGGTAGAGATGAGTTTAGCAGAGTGTCAAAT GCAGCTTGAGGCATCACAAAGTCGGATAAGGGAAGCAGATTTGAAGGTCACAGAGCTTCAAACTCAGCTAGCCCTTGCAAAGAAGTCAAATGAAGAAGCG AATGAAAAAATAAAAGCTACCAAAACAAAGAAAGAGACAGCTGAATCAAAACTCAGACTTGCTCAAACTGAGGTAAAAGAATTGGTTTCAAAAATCAGTT CATTGGAGAAAGAGGTTCGACAGGAGCGAGCTTTATCTGCTGAGAAATTGAGCAAGTGCGGGGAGTTGGAGAATGAGCTTTTGTCAATGAAGCGTGAGGC TCAACTTCAGCAAGACGCTGAGATATTGCGTAGAGAAAGCGCCAAAAGCGAGTTGAAGTTAAAGCAGGACAAGGAACTTGCATTGGCTGCAAGTAAATTC GCCGAGTGCCAGAAAACCATTGCATCTCTTGGACAAAAACTAAAGTCCCTTACAGCATTGGAAGATTTCTTACTTGATTCAGACACCCATATAGACTTAA CAAGTGAAGTTACACAAGGTCCTCAAAATGGTGGTGCACACTTGAAATTGCAGCATAGTAATTTGAGTTTGCCCAAAAAAGATCCTGAGTCACAATTTGC ACTAAAATCATGTGTTACACATCAGAAAAGCCGGAATAATAGTTATGGTAATGTGATTCCTAGGAGTAAGAGTGTAAGCAGGACAAGAAGACAGTGAGAA TTATTGGAGAGAAGATTGAGTTGTAAATTTGGGTTGTTCATTCTTATCTCCTGGATTCAACACATATACATATATACATACATATATATATATATATATA TATA BLAST |
Tissue | pods |
Gene name | LI_gene_171797; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_454344
Blastp | Filament-like plant protein 3 from Arabidopsis with 43.71% of identity |
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Blastx | Filament-like plant protein from Lycopersicon with 44.67% of identity |
Eggnog | filament-like plant protein(ENOG410YAAZ) |
Kegg | Link to kegg annotations (AT3G05270) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458537.1) |
Pfam | Filament-like plant protein, long coiled-coil (PF05911.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |