| Id Trinity | TRINITY_DN49736_c0_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_454350 |
| Sequence | TTTTCACTCTCATTCTTTGTTCTTCAGCAATCCCAATACTTTTTGATAATTGAAGAAATGGGTTTCTATTAATTCATTCATATTTTCTTACCTTTTGATA ATTAACAAATTCTCAGAGGAGTTGTTACAAAAATTGAGTGTGAAGTAAATAAATTTTATTACCCATTAAAGCCCTGCACTTCATTTCTCAAAAAGATGGA CCGAAGGAATTGGCTGTGGCGCAGGAAATCATCCGAAAGAAGTCCGGGTGAAACTGAGAGTACTGGATCAGTATCATCCCTTTCCGAAAGGTTATCTGAT GATCAGGTATATCCAATCCAAGCTGCTCTATCACCAGAAGTCACATCTAAGGTTGCACTGAATGAAGAACCTGTTGCTGATGTGAAGATTCTAACAGACA AATTAGCAGCTGCTATACGAAATATCAGAGCCAAAGAAGACTTGGTAAAGCAGCATTCAAAATTTGCTGAAGAAGCTGTCACTGGCTGGGAGAAAGCTGA AAATGAAGTGTCAGCTTTAAGACAGCAACTTGATGCTGCAAAGCAGAAGAACACAATTCTCGAGGACCGACTTGGTCAACTTGATGGGGCACTCAAAGAG TGCATGAGGCAGCTTCGACAAGCTAGAGAAGACCAAGAGCAAAAGATTCATGAAGCTGTTGCAAATAATTCTCATGATTGGGAATCCAAAAAATCGGAGC TTGAGGGTAAAGTTGCTAAGCTTGAGGCCCAACTTCAAACAGCTAAATCAGATACCGCTGCACCAGTGCTTTCTGATCTTCGCAAGAGACTTGAGGCTGT CGAGAAAGAGAATTCAGTTCTTAAAATTGAGCTACAATCTCGACTCGAGGAACTAGAACTCAGGATTGCTGAGAGGGATTTGAGTACCCAAGCTGCTGAA ACAGCAAGCAAGCAACATTTGGAGAGCATCAAGAAGGTTGCTAAGCTTGAAGCTGAGTGCCGTAGACTGAAAGCCTTAGCTCGCAAACCATTCTCTGTTA ATGATCAGAGGTCTTTGACTGCCTCTTCTGTTTATGTCGAGTCCTTCACAGATAGCATGTCAGATAGTGGAGATAGGCTAGTGATAGTTGGAAGTGAGCC AAGCCGTTCTAACTCATCAATATCTGCTTTAGTTGCGGAACTTGATCAATTTAAGAATGAAAAGGCTACTAGAAAAAATCATACAGTCCATTCAACTAAG GTCAATCTCATGGATGATTTCCTTGAGATGGAAAGACTTGCTGCGTTGCCAGATATGGAAACTGGAAATAATTTTGTTGAAGTTGGAGTAGCATCGGACA AACTTAATGTTGGCCAGGGTACAATGAAAGCTGAAATTGAAGCTGCAGTTCAAAAGAATGTTGAATTGGAAAAGAAGCTGGAGAAAATGGAGGCAGATAG ATATGAGGTAGAGATGAGTTTAGCAGAGTGTCAAATGCAGCTTGAGGCATCACAAAGTCGGATAAGGGAAGCAGATTTGAAGGTCACAGAGCTTCAAACT CAGCTAGCCCTTGCAAAGAAGTCAAATGAAGAAGCGAATGAAAAAATAAAAGCTACCAAAACAAAGAAAGAGACAGCTGAATCAAAACTCAGACTTGCTC AAACTGAGGTAAAAGAATTGGTTTCAAAAATCAGTTCATTGGAGAAAGAGGTTCGACAGGAGCGAGCTTTATCTGCTGAGAAATTGAGCAAGTGCGGGGA GTTGGAGAATGAGCTTTTGTCAATGAAGCGTGAGGCTCAACTTCAGCAAGACGCTGAGATATTGCGTAGAGAAAGCGCCAAAAGCGAGTTGAAGTTAAAG CAGGACAAGGAACTTGCATTGGCTGCAAGTAAATTCGCCGAGTGCCAGAAAACCATTGCATCTCTTGGACAAAAACTAAAGTCCCTTACAGCATTGGAAG ATTTCTTACTTGATTCAGACACCCATATAGACTTAACAAGTGAAGTTACACAAGGTCCTCAAAATGGTGGTGCACACTTGAAATTGCAGCATAGTAATTT GAGTTTGCCCAAAAAAGATCCTGAGTCACAATTTGCACTAAAATCATGTGTTACACATCAGAAAAGCCGGAATAATAGTTATGGTAATGTGATTCCTAGG AGTAAGAGTGTAAGCAGGACAAGAAGACAGTGAGAATTATTGGAGAGAAGATTGAGTTGTAAATTTGGGTTGTTCATTCTTATCTCCTGGATTCAACACA TATACATATATACATACATATATATATATATATATATATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_171797; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_454350
| Blastp | Filament-like plant protein 3 from Arabidopsis with 43.71% of identity |
|---|---|
| Blastx | Filament-like plant protein from Lycopersicon with 44.67% of identity |
| Eggnog | filament-like plant protein(ENOG410YAAZ) |
| Kegg | Link to kegg annotations (AT3G05270) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458537.1) |
| Pfam | Filament-like plant protein, long coiled-coil (PF05911.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |