Ll_transcript_454105

• Id Trinity: TRINITY_DN49746_c0_g1_i1
• Name Transcript: Ll_transcript_454105
• Sequence: CCTTAATCACTTTTCACAATTCACTTTTTAACCTTACCCTTTCCCTCTTTCTCTCTTAATTTTATTTTACATATTATCTCTCTATCACTTATAAGTTAAT CTGTTTTTTTAACTACATTCTGTTTTATATGAAATTCTTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCAACCTCAACCAACGGGAAGAATAAGA AAAACTACGCAGCACCATCGTAAGCATTTCAATTCCCTCTGATTTCTCATTTTCTCTTCAATTTCCATAATTTCAATTTCACTCCAAACTCAACTCATTA TTCTCTTTTTTCCTTTCGCTCTCGTGGGGGAAAATAAATTAGGGTTTCTATTTTCTTCTCTCTGTTAAATTGAAATCTCCTCTTTTTCTTCTCTTCTTAT CGTACGTTATTAATATTTTGAATTCTTAGTCCTATCGGGTTTACGAGAAAACACAAAAACAAAAAAAAGATAGAATTTTCGTTTTTTTTTGTAATTTTCT GTGCATAAATTTGACTATATTATTCGTTCTCTGATTCAATTTTAGATGTTTTTTTTCTTCTCATATATGGTTTGTTCGCTCGTTTATAGCAAGAAACTCT GTGAAGTTTTTGGTGCGTTGTTTTAGTTTGCCATCTGAAATCGAGGGTTTTCTTGTTAGATCGCTTCCACGTTTTTTTTTTCATTTTACCTATTGCTATT TTCCGTTTTTTATTTTCACTGTTGATCTCATGAAAAGCCCGAAAAAAATATTGTCTTGGAAAAGCCCCAAAAACAATAAAAAATAGGGTTTGGTTGGCTG GTTGATTTGAGTTGAGTTGAGGGTGTGTATAGATTATTGATAGAAAGATAGAAGAGAGAGATGGCTCTGAATTTCTCACAAAGGCCGATTTTTGCGGGAG AGGAGAATTGGAGTGGTGGTGGTGATGGGTTTCGATGGCATGATGCCGAGAATCATTTTGATTATGGGCGTGATAGGGGTTCTCCCACACAGGATTGTGT TTCCAATGACATTCTTGATCGTTTGCCTTCGGACCCCTTCGGTATGGACATGAGCACCACCTTCACTGCTGCCTTCACCGAGTTGTATGGTGGGTACAGG ATGGATGAGGTTGCAGCCAGTGACAACAATTACCAGTTGTTTGCTATGAACTTTTTTTGTAATAATTTCAACAATGGTATAACCTTCCCTGGATTCCCCA CTGGAGGGAGCATGCACGTTGAGGAGAAGAGTGAGGAGAGGAGGCCACACAAGATGAGCATCGGTGAATGTTCAAGTAGAGAATCCTGTGATTCTGTCTT TCAGTCTGCTTGTGATGTCGATGATATGTTGAGTTTCGACTGCGACTATGAAGATGGCACGGGTGATGCTGCTGGTGAGGATTGCCTTGGAGAGGATGAA CTTGGTCCTCACCCGGCATTAAATTTTGCTCTTTTTTATCTGGGCTTGGCTGATCTTCTAGCTGTGGAAAGGGTATGCAAATCATTGCATTCTACGGTTC GGGGTGATCCGCTTTTGTGGAGGAGTATCCACTTAGACCAGCCTTTAAATGAGAGGATTGTGGATGATGTTCTTTTCCAACTTTGCAATAGATCTCAGGG TAAACTTCAGTGCTTGAGACTGGTTGAGTGTACTAGGATAACCGATGATGGTCTAATGCGTGTCCTTGAAGCCAATCCCACATTGATCAAGTTGAGTGTC CCTGGATGTACAAGGCTCACTATCGATGGAATTGTAGGTATTTTAAAAGCTTTCAGGTCTCTGGGTACCCAAGGGGTGAGGCATTTACACATAGGTGGCC TCTATGGTGTTACACAACAGCATTATGAAGAAATATTGTTCCTGTTGGGAACTGATAGCCAGATGCGGCAGCACTCTCACAAACCACACTTCTATTGTAG GGGAAACTTATATTTATCATGTGATGATAATCGAGCCATAGATATTGAAATTTGCCCAAGATGCCAGAATTTAAGGCTTGTGTATGATTGTCCTGCAGAG GGTTGTCAAGTGGTGGGTAATGCCACTCAGGCATGTAGGGCATGCACTCTTTGCATACCTAGGTGCAGTCACTGTGGCCGTTGCATCAATGACAGTGAAT ATGAGGAGACATTTTGTCTGGAATTACTTTGCTCTATGTGTTCTAAACAGCTAGTAAAGTGTTCTGAAATGATGGAGAAAAAGTTTGGACCAACCAAATC CATTGTTCTCCCTGAAGAAATTTAAGACTCATGTTGCTGTAGAGTATCTTTTGGAGATCCTTACGAGGAGTTAAGTCCTATGAACTATGAAATGAAGAAA TGTTGGATCCTGTTGAAGTCCTATAACTTTGTATTTTGGTATCGGAGAGGGGTGCTTTGAATATGTGGATTTTCCTGTTGTAAAGAAAGTGGAAAATGCC TGGATAGTTCCCAAAAAAAAGGAGCGGATGATGACTTATTTCTTGTGTTTATGCTACGGTTGGAGTAATCTGCAGGAGTTCAATCAATTGCATGGTTACG GATCACATACTGCACAGCTATAATGGGCATATTTGATCATGTGTCACTCTGATTATGAAGGCTGCAGTCGCGGAGCGTTTGTGTTTTGCAATGCAGCCTT TCTTGTTTGGGTCACATCCTGTGATAGATCTAGTGCACCAGTTTGAATTTTCTGATCAAACTTCTGGCTACTACATATTCATTAGCAGTATATTGGTAAT TCATTGTTGCCATGTGTATGCACTCTGTTTATTTTGTTTTGCAAACTTCGGAGAAGAGGATAAGAAAAGGGACATTATGGTTGCCCATGCTTATGTTACT TTTAGCTTGTATGAAATGAAATTCATTTATTATGAACTTTGGATTTTGAAATGAAAATATTATGTCCTTGAGTAAAAA
• Tissue: pods
• Gene name: LI_gene_171871;
• Additional information: details;

Expression of Ll_transcript_454105

FPKM

• PAB: 8.4
• PNAB: 5.1
• PS1: 5.5
• PS2: 5.5
• PS3: 7
• PW1: 4.3
• PW2: 3.3
• PW3: 5.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454105

• Blastp: F-box protein SKIP14 from Arabidopsis with 44.81% of identity
• Blastx: F-box protein SKIP14 from Arabidopsis with 43.79% of identity
• Eggnog: F-box protein(ENOG410YFZ3)
• Kegg: Link to kegg annotations (AT3G26000)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463958.1)
• Pfam: F-box domain (PF00646.32)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;