Ll_transcript_454111

• Id Trinity: TRINITY_DN49746_c0_g1_i4
• Name Transcript: Ll_transcript_454111
• Sequence: GTTAATTTGAGTATAGGGTGTGTATATAGATAATCAGTAGTTTGATAGATAGATAGAAGAAAGATGGCTCTGAATTTCGCGCGTTGGCCGATTTTTGTGA GGGGGGAGAATTTGAGTAGTGGTGGTGATGGGTTTCGATGGCATGATGTTGGGAATCGTTTTGATTATGGGGGAGGTGCTGCCATACCGGATTTTGTCTC GAATGATATTCTTGATCTTTTGCCTTCGGATCCCTTCGGTATGGACATGAGCACATCCTTTACTGCTGCCTTCACCGAGTGGCTGGAGTATGATTATGGT GGATACTGGAGAGATGAGGTTTTGGCGAGTGAGGACAATGATCAGGTTTTGGCTATGAACTTTATTTGCCGCAATTTCAAGAATGGTATGATGTTTAATA GATTCCCCACTTGGGGGAGCATGCGTGTGGAGGTGATGAATGAGGAGAACAAGCTGCAGGAGATGAGCATTGGTGAATGTTCAAGTAGAGAGTCCTGTGA TTCTGTTTTTCAATCTGTTTGTGATGTAGATGACATATTGGGATTTGGTTGTGACTTCAAAGATAACATGGATGATGGTGAGAATTGCCCTGGAGGAGAC GAAGTTGCTCCTCATCCGGCATTAAGTTTTGCTCTTAGTTATATGGGCTTGGCTGATCTTCTTGCTGTTGAAAGGGTTTGCAAATCTCTGCATTATGCGG TTCGAAGTGATCCGCTTTTATGGAGGAGTATTCACATAGATCAGCCTTTAAACGAGAGGATTACGGATGATGTTCTTTTCCAACTTACCAATAGATCTCA GGGTAAACTCCAGTGCTTGAGCCTGGTGGAATGTACTAGGATAACTGATGATGGTCTAAAGCGTGTTGTTGAAGCCAATCCCACCTTAATCAAGTTGAGT GTTCCTGGATGTACAAGGCTCAGCGTTGAAGGAATTGTGGGTATTTTAAAAGCTTTCAGGTCTGTGGGTATCCCAGGGGTGAAGCATTTACACATAGGCT ATGGTGTTACACAACAGAATTATGAAGAACTTATGCTCTTGTCCGGCACTGATAACCAGATGTTGCAGCACTCTCACAAACCGCACTTCTATCGTAGGGG AAACTTATATTTGTCCTGTGATGATGATCGAGCCATAGATATTGAAGTTTGTCCAAGATGCCAGAATTTAAGGCTTGTGTATGACTGTCCGGCAGAGGGT TGTCAAGGGGTGGGTAATGCTATTTATGCATATAGGGCATGCATTCTTTGCATACCCAGGTGTAGTCAGTGTGGCCGTTGCATCAATGGCAGTGATTATG AGGAAACATTTTGTCTGGAATTACTTTGCTCTTTGTGTTCCGAACAGCTAGTAAAGTGTTCTGAAGGGATTGAGAGAAAGGTTGGAACAACCAAATCCGT TGTTCTCCCTGAAGAAAATTAAGACTTGTGTTGCTGTAGGGTATCCTTTGCAGGTCCTTTCTAGGGATCAAGTCCTACTAAGTCAAGAAATGTAGGATGC TGTTGAAGTTGTATAACATTCTTTGTATTTTGGTCTGAGTGAGATACATTCAATATGTGGATTTTCCTTTTGTAAAGAAAGTGGAAAATGCCTGGATAGT TCGCCAAAAAAAAAGAGAAAGTGAAAAATGACTTTATTCTTGTATTTCTGTTACGTTGGAGTAACCTGAAAAGTTTAATCAATTGCCATGGTTACCAATC ATGTACTTCACAGTTAATGGCACTCTGATTGTGAGCTAGGGGTCGGGATATTATGTTTCGCGCTGCAGCCTTTCTTGTTTGGGTCACGTCTTGTGATAGA TCTAGTGCATCAATTTTATTTTTCTGATCAGACTCCTGGCTACTTATTCATTAGCAGTATTGATAATTCACTAATGCCATGTTGCGTATGTACTCTGTTT ATTTTGTTTTGCAAACTTCCAAGAAGAGAATAAGAAAAGGGGTAGTATTATGTTCCGAATAAGCCAATGCTTATGTTACCTTTAGCTTGTATAAAGTGAA ATTCATTTGTTGTGGACTGG
• Tissue: pods
• Gene name: LI_gene_171871;
• Additional information: details;

Expression of Ll_transcript_454111

FPKM

• PAB: 0.7
• PNAB: 1.6
• PS1: 1.4
• PS2: 0.9
• PS3: 2.3
• PW1: 0.9
• PW2: 1.8
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454111

• Blastp: F-box protein SKIP14 from Arabidopsis with 42.42% of identity
• Blastx: F-box protein SKIP14 from Arabidopsis with 41.83% of identity
• Eggnog: F-box protein(ENOG410YFZ3)
• Kegg: Link to kegg annotations (AT3G26000)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433542.1)
• Pfam: F-box domain (PF00646.32)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;