Ll_transcript_453961

• Id Trinity: TRINITY_DN49747_c1_g1_i1
• Name Transcript: Ll_transcript_453961
• Sequence: TCACAAATGTATTTTATAACTATCAAATTTTTTGTTCCTCTTTCTTCATCTCCAAAAATTCAACTCACAAGTACAACAATATTTTTCATCTAAAATGCAG ACATTATTTTCATAGAAAACAGGTTCTTGTTTTATTACTTATATTATTATTACACTCACTCACACCCATTTCTCAATATTAATCACACAGCAGAACCATT TGTTTTGTTATAGAAAAGTAGCTAAGTATTTTATACTTCCATCTTTGGCCCCTCCCAAAAGTTACTTATCTTGGCCACTCTTCTGATACCACATTGTGAA GAGAATGAGGTCTGATCCAACCAAAATTTCCTTGCAAAAGCACAATCATGTGTGTGTTAAGTTTTCTGTTTCATTTCTATTGGTGGGTCTCTCTTTTCGC CTTCTCTTATGGGATTCATTCAGCTTTTCATCACTTATTGAGACATCTACTCCTATAGCAAAGGAAAAAACAGAGTCCTCTGTTTTTCCTTTTCCAATTG AAGTATCTGATTCTGTTGATGTTCCAGGAAATAACCAGAGCCAAACTTCTCAGAATGATTTAGCTACAGAAAAATGTGATATTTTCGTTGGAGAATGGGT ACCAGACCAATCTGGTCCAATATACACAAATGAGAGCTGCCATGAAATTCAACATCATCAAAATTGTATGAAAAATGGACGTTTTGATTTAGGGTACCTT TACTGGAGGTGGAGGCCGAGGGACTGTGAAATACCCAAGTTCAATCCAAAGAAGTTTCTTCTTCTTATGAGGAATAAATCATGGGCTTTCATTGGTGATT CTATTTCCCGTAACCATGTCCAATCCTTACTTTGCATGCTCTCACAGGTACTGTCAATTACTATACCTGAAAAAGATTTTATTAAGAATGTGCTTTTGAA TTTCATAAGGTCTAATATTGCTCAAATGCAATCTAATACAATGGATGGGGATCTGTTGTCTCAAACTATGTACCAAATCAATCACAATGCAAAAAAATGA TAAATGTTTAATTTTTTTAACTGATGTAGTGATATAACATGTTTTTATTGGTTTGGGACAAACTTTGAGACAGGATTCGGGACAACATATCATTCTCCCT AAAACAACCTTAATGCGGTTATGTTATATTATGATACAAATGTATCATTTTGATTAGATGTAATGCAACAATTGCAAAAGGATACCGTTGTGGAGTACAT TGTAACCATATTTTTGTGGCCTGCAACTCAACTTTGAAGAAGTTTATGTATGCTATGAAAATATTTTTCTTCACGTTTTCTCTATTTGATTATAATCAAT AATTGAAAACGGGCCATGTGATAGTATGATATGAACTAATTAGGTTCACATGTTGCTTAGAGATCCTTCCACTACATCAATAATGAAGAATGGTCAAAAT AAATAACTAGATATAATGATAAAAAACCAATAATCTAAAATGAACCATGTGATTTTATGATATAAACTAATTGTTGCACATATTGTTTATATCGTTCTAG TCCATATATATTTCTTGGTTTTTCTCTGTATTTAAATCTAGTAACACTTCAAGAATGTGAAGTGAGGCCATGTGATTTGTGTGGTATGAACTACTGAGTT GCACATATTGTTTAGTGAGATTTTTCCAGTTCATCGGCCATGAAGCTTGGTCAAAATAATAATCTAGAATTTAATTTAAAGAATAATTTAAAATGAGACC ATGTGACTATATGATCTGAACTAATTAGTGGTACATTCTGACATGTTTATATTGTTTTTACTTTTTAGTCATCTATCATGAAAATTTGTCAAAATCAATC ATGCAGTAGTTGTTTACCAGTTTGATTTATGAGACACTAAGTTTATTTTTCTTGGGGTATGATGAACATTAAGGTTTAACAGGTTTCACTGCATGTCATT TTCTGGGTAATTCCTGTCATTGTTAACAAAGCTGTTGAATTACATTTGTGGAAAACAGCTGGAAGCCTAGAGCTTATAACTTATAATGCTGGTCCACTGC CTCTAAATACAAATAGTTTAGTGTCCTTTTCCAAACAGGTATACCCACCTTTAGAATTGAAAGACTTGTACACACTCCATCAGGGTGAGTCTGGTTTAGT GAATTGTAAATTTTCTATTTAGATTTCTTGTTAACCAGTAACAGTTTATTGTTACTGAATTACTCCATGCAAGTGTATTTTCCTTACATTGTTGTTGTTG TGTCATGTCTCATTTTATGTTTTGTAATTTAAGGTAAGAGACGATATTTTATATATTCGATATCACCTAATAAAATCAGTTTTTGAATACGTTCTTTTGT AATGATTAGGTGTGGAGTAAGCATTCAATGTGTTACTTCTTTCTTGCATTGGAATGTATTGCATCAATCTTTGTCCCCACGCAATACCGGGAGCACATTA ATGTGCACTACTATGTGTGCCATTAGCTATGATTAGTTGAAAACAATATATTTAAGTTATAAATTTAATTGTTAATTATTTTTCTGACCAATCGCTATTC GTGGTACATGGAATGGCACAATGTTGTGGGACAAAAGATGTGGTCCCCATAATACCTGCCTTATCTATATGTGGGATCATGTATTGTTGGTTGTAAGCCA TTAATTCTGTCCTACAAATTGGTTACTATATCAAATTCAAATGATCCTTCTTGATTCTGCAGGTGGAACCAGCTGTTGAGATCTACCATGACAAGGAATA TAGATCAAAGATATGGAGATTCCCCTCTCACAACTTCACTCTCTCAGTAATCTGGGCCCCTTTCCTTATTGAAGCAGCTATGTTTGAAGACAAAACAGGA ATGACCTCTTCAGACATACATCTTCATCTAGACAAACTAGACAACAAATGGACCAACCAATTTAACAACTTTGATCATGTTGTAATTGGTGGTGGCAAAT GGTTTCTCAAGACTGCAATATACCTTGAAAACAACACAGTCACAGGCTGCCATTACTGCCCTGGAAAGAATTTAACAGAACTAGGACTCGAATACGCATA TCGCAAAGCACTGCAGCAAGTTTTTAACTTCTTTACAAACTCTAACCATACAGCAACTGTTTTCTTCAGAACCACCACACCAGACCACTTTGAGAATGGA GAGTGGTTTAGTGGAGGGTATTGTAATAGAACAGTGCCATTCAAAAAGGGTGAGATAGATATGATAGATGTAGATTCTACCATGAGAGGCATTGAACTTG AGGAGTTTCAGAAGGTTTCATCTCTAGGATCTGATAAGAGTGTGAACTTGAAACTTATGGACACAACTCTACTCTCACTCTTGAGACCAGATGGACATCC AGGACCATACATGCAGTTCCAGCCATTTGCAAAGGATAAGAAAGGCAAAGTTCAGAATGATTGTCTGCATTGGTGTTTGCCAGGACCTA
• Tissue: pods
• Gene name: LI_gene_171876;
• Additional information: details;

Expression of Ll_transcript_453961

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.3
• PS3: 0
• PW1: 0.1
• PW2: 1.1
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_453961

• Blastp: Protein trichome birefringence-like 25 from Arabidopsis with 51.98% of identity
• Blastx: Protein trichome birefringence-like 25 from Arabidopsis with 63.49% of identity
• Eggnog: expressed protein(ENOG410XSGA)
• Kegg: Link to kegg annotations (AT1G01430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461743.1)
• Pfam: PMR5 N terminal Domain (PF14416.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;