Id Trinity | TRINITY_DN49749_c1_g1_i6 |
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Name Transcript | Ll_transcript_455387 |
Sequence | AAAAAAAAAAATTATTTGTTTTTAAAATTGATAAAATTGTTATTTTTTGTGTGCGTTTCGTTTTTTTTTTTTTTAGGGTGGTTACACACAAATAATTTAT ATATTAAACCATACCAAATAGGAGAAATTTCTTTAAAATAATAAAAATAAAAATCATTGGACATAAATACCCTACGTCCCGCATGTCGGAACCTTCTTGA AGGAAGCTTTGTTGTTGGTTGAGTTGAAGAGAAGAGAATATGGATGACGAAGAACACGAAGTGTACGGAGGAGAGATCCCTGACGTTGAAGGAGATCATG ACAACCCTGACGTTGACATGTCCGCCGCCGATGATGACGCCGCCGCCGTGAAGGAGCTTGACGAGATGAAGCGCCGGTTGAAGGAGATGGAGGAGGAAGC CGCCGCTCTCCGCGAGATGCAAGCTAAGGTCGAGAAAGGAATTGGCTCTGTTCAAGATCCTGCTGCTGCTGCTTCTTCTCAGGCAAACAAGGAGGAGTCA GATACTCGATCTGTTTTTGTTGGCAATGTTGATTATGCATGCACACCAGAAGAAGTGCAGCAACACTTTCAATCTTGTGGTACAGTGAACAGAGTCACCA TCCTGACTGACAATTTTGGCCAGCCTAAAGGTTTTGCTTATGTGGAATTTGTTGAAGTTGAAGCTGTTCAAGAGGCTCTTCTCTTGAATGAATCTGAATT ACATGGCCGTCAATTGAAGGTTTT BLAST |
Tissue | pods |
Gene name | LI_gene_171890; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_455387
Blastp | Polyadenylate-binding protein 3 from Arabidopsis with 80.37% of identity |
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Blastx | Polyadenylate-binding protein 2 from Arabidopsis with 78.05% of identity |
Eggnog | Polyadenylate-binding protein(ENOG4111PFV) |
Kegg | Link to kegg annotations (AT5G10350) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462161.1) |
Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |