Ll_transcript_455388

• Id Trinity: TRINITY_DN49749_c1_g1_i7
• Name Transcript: Ll_transcript_455388
• Sequence: AAAAAGCTTCGTTGGTTGAAGAGAGGAGAGAGAAAATGGATGAGGAAGAGCACGAGGTGTACGGAGGAGAGATCCCTGACGTGGAAGGAGACCATGACAA TCCCGACGTTGACATGTCCGCCGCCGATGATGACGCCGCCGCCGTGAAAGAACTCGACGAGATGAAGCGCCGGTTGAAGGAAATGGAAGAGGAAGCCGCC GCTCTCCGCGAGATGCAAGCTAAGGTCGAGAAAGAAATTGGATCCGTTCAAGATCCCGCTGCTGCTTCTCAGGTAAACAAGGAGGAGGCAGATGCTCGAT CAGTTTTTGTTGGCAATGTATGAATCACCCTATCTCATAACATCTTGTTATACAAGTCGTTTCATTTTTTACTTCCTTATTTTTTACTTCAATAACCGTG TTTGTATACTGTTTGAGAGCCCTCGGTACATATTTTATCATCTGTGTTGGAAGTTGGCAAGGATATTTTAAAATTTTGGGGATGTCTCTTAAAACATTTT GCAACCTTCTCTTGTACCCTTCTCTTAGACTCTGCCTGTCTCACTGTAACTCCACTTGCGGTGGTAAGACCACATACATCAATCCTCCCTAGGCCCCTCC CAGTAGAAGGCTCGTGCATTGGGCCATCCATTTTTTGTCACACTGCCCTTTATTTGACATTTGGCAATTCTGAAATTTGAAACTTCTTGCACTTGATTAT CACCGAGGAAAGACTTGTTCTCAATAAAGCTATCTGTTCATTGGCTATCTTCGTTGTCTAGTGATTTGTCCTAGTTTAGAAGCATGTGATAATTCTATTA ATTGGTTTCAATAAACTTCGGTTGAATGGATTGAGTTTAAGTATATAGGTTCATTATTGTATTGCATTCTCTTATTATAATATATTTGAAACTGTACATG TTCTGTTCTGGAGTGAATACTGCTAATCTTTGGAGACAGGTTTTGACTTTATGTCGCACAATGATCGCAGGGTTATTCTTATTACCAAGGTTTCATAGTT AGCAGTGGGACGCTTGTACTGTATTTTGTGGGGGATGAGACATGTGTTTTTTTGCATTCGAATTTTATTGTTGTAAAAAAAGTCAAAAGAATGAGGAGAA AAAACATGAAAGCCTCTGAAAAGAAAAAAAGAAAAACAAATGAGAAAACATTTTACAAAAGAAAAATAGAATGAAAAAAGAAAAGAAAGAGAAAAAAATG ACAAAAGAGAGAGAGAGAAAATTACAAGAAAAAGGAAAAATATAGAGTATGTTGATTAAACTGTGAAGGCATCTCTTGGGGATGGCTGAAACTGGTAAGG CTGATGGTAGAATGTGTTAAAGATGCTTCAACTGTACTACTGGAGGAGACAGCTTGTGGGTTCTTTTGGAAGAACATTCTGTAAGTGTTGGGAACATATT CTTAGTGATAGAACCCTCTTGTTGATTGCAATGAAGCCTGTGGTACCTCTGTTGTGTGTCATTTACCTTTTCTAAGTCCTTTTTATAAATTAAGCATTGC TTTCGTTAATGCCAGGCAACATAGTATTGCAGCCTTCCTCCTTGGGGTAATTTGTCGAGTATAAAAGGTTGTTGTTGTTGTAAATTGCTATGAGGAGGAA ACTAGAGTAGAATGCTTGAGGAGTTTCTTTTGAGTTTGAGGAGCTTGTAAAATGATGATAAATGTTAAGAACTCTTTTTTTAGTGGGGTGAATTCCTTTG TTTTGTTATGTATTTGGGATTTGTAAAAACTGTCCTGGGTGATATTTGTGAACCCCAATTTTTACTTTTTTAAGGCTGGGTAGTTGTTTTTGAAATATTG GATTAATATGATAAAAAATATTTACAGGGACACGAGTCTTGAATGTTTGTGATCTATAGTGGTGTAGTCCAAGAGTCTAGTTTCTTTATATAAATAATAG CCAAGTCATATCTGACCAGCTTCTGGATTAATATGATATGTTGCTCATCTTTGGCATCAAAATCCCTTCAATTGATTCGTTGTGCAGGTTGATTATGCAT GCACGCCAGAAGAAGTGCAGCAACACTTTCAATCCTGTGGTACAGTGAACAGGGTCACTATCCTGACTGACAAGTTTGGCCAGCCTAAAGGTTTTGCTTA TGTGGAATTTGTTGAAGTTGAAGCTGTTCAAGAGGCTCTTGTCTTGAATGAATCTGAATTGCATGGCCGTCAGTTGAAGGTTTTACCTAAGAGAACTAAT GTTCCAGGAATGAAACAATATCGTCCTAGGCGCTACAATCCTTACATGGCTTATGGCTTCAGGAGGCCATATCCTCCTCCTTACTTTTACTCCCCTTATG GATATGGGAAGGCACCTAGGATTTCTAGGGCAACTCGGTACATGCCTTATTACTAGAAGTTTGCATGGAATGCGGTTGAAGATATGATGCTCGGTGCATT CTGGAGCAATTATTTTTTTGATCTGGGAGCACTGGGTAACGCATATCGTTATTTGCATTGTGTACTTCAGTTGAGAATACCTACTGCCTATTTATATTCA GCTATAATAAGTCTACTATGTTTATCCCTTGGTTCTTGAAAAATGGTTTATAGTTGCCATTGAATATTATGTTAGTGACTATAATTTGTACTGCTCCATA TTATGGTTATATAGTTGATTTAGTCTATTAAATCAGAGTTATAATAGTGCAGAGTGAGTCTTCATAGTTTATGTTGACCAAAGATGTATGCTGCAGTAAA CTCATATGTCCTCCTTCCCTCTCTTGTGGCATGAAAACTTTGTCATATCTCTGTCGTTGAAATGAATATCCACAAATCAGAATTGAAATATGGATGAAGT TTTAATACTTTGTTGGTTTTGATTTATGACGATATTAGTCTTATCTCAAGAGTTTCTATCCCCGTTCCAACTTTTAAGCCATTTATTCGAGCAGGGAAAT AGGATATGATTATTGGTTAGGGTTGGCCTTGTCTTAAACGAAAGAAATGTCGAGTGTTTGTGTTGGAAGGAACACTGTTATTACGACCCAGATCGTGCTA CAGTCATGGAGATAAAGAGTGTTGTCTTGTTGCTATGCATTTCTTGGTCATCCAATTTTGTATTCTAATATCTCTACTTTTTATAATGTCTTATGAAGAA TAAGTCAGTTCTCCTATTATTTCCAACACAATCACACTTGGCATTGTCCCCTGCGCCCTCAGCATTCTGCTTTTAGGTTATGATTTTAGATTGATAATAT CCTCGTACTAAATCATCGTACTCACAATAAAGTGATATATGTTATTTGTAAACCCATCATTAGTAAATAAAGTATCATTTTATGATGTCACTTTTTCGTG GGCAGGTGAATATATTATTTTCCTTTTAATCTATTGCCCATGTAATATAAAAAGAAAATGATATATCATCCTACTAATCTTTCTATCTATGAGAAAGTTA ATATCATAAGGTGATACTTTATTTATTAGTGATTGATTTACAAGTGATACATGTCATTTTTTTATGAGTATGAAGATTTAGCATGAGGATATAACATACT TCATTCATGTTCTTTGTTAGATTGCGTACTCATCTTTTAAGCCCCTCCTCCTCCCTCTTTCCCCTATACTCACAAGTTCTTCCAATTTTTAG
• Tissue: pods
• Gene name: LI_gene_171890;
• Additional information: details;

Expression of Ll_transcript_455388

FPKM

• PAB: 2.3
• PNAB: 3.5
• PS1: 5.3
• PS2: 6.4
• PS3: 7.1
• PW1: 5
• PW2: 5.1
• PW3: 5.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_455388

• Blastp: Polyadenylate-binding protein 3 from Arabidopsis with 76.77% of identity
• Blastx: Polyadenylate-binding protein 2 from Arabidopsis with 84% of identity
• Eggnog: Polyadenylate-binding protein(ENOG4111PFV)
• Kegg: Link to kegg annotations (AT5G10350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_004504101.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;