Id Trinity | TRINITY_DN49749_c1_g1_i9 |
---|---|
Name Transcript | Ll_transcript_455390 |
Sequence | GATGCAAGCTAAGGTCGAGAAAGAAATTGGATCCGTTCAAGGTTCTATTCACTTTCATTTCTTCGTATTTCTATTATTGTTAGTAATCAAAACTTGTTTA ACCATGAACTTGCATTGTGAAAGTTTAGCATTCTGATTAATTAATCGAAACTTCTGCTGTTATGAAAATGTGAAGATGCTTTAGGTTTTAAATTCTATAA TTAGAATTTTCAAGATCTAGTGCATTATATATACCTAAACATCAAATTTTCAATTTACTTCAACTTGTTTATTTTTTATTTTTGGATTATTGATAATAAG AGTGAAGTCATGTCAGTTTTTTGTTAACGATATTGTTTCAAATTGTTTGTTCTCATCTAAATCAACAAATTGTAGTTTTCTGAAAACTTTGGGCCAATTA CGGACCTACATAATCACGGTATACTAATCTAAATTCGTAACATGGCGCACAGACACAAGACAAACTTTCTTGTATTTTTATTAGCCCCATAGGTGTGCCA GTTAGATGTGAATGGTAAATTAATGACTTTGAATATGTTATGTGTATATTTGACAAAAATGGTTTCGTGATACATAGCATTTCTGTTTGTGGTTCTTCGT CAAATATGAATGAAGCATAATATTCAAAAGTTACTTACCATTAACAAAAAGCCTAAACAAAAGGGCCCTTACTATGTCTTATATCCTCTCTAGTATGGTC GGAGTTTTGGAAAAAACATGTAGAGTGTATTCATTTACCAACTCACTTTACTATTTAAAATGAAAGATGTTTGTAGTTACTTTACGTTGTTATGATTCAC TTTTAAACTTGATTGAATCTCCTTTGTAGATCCCGCTGCTGCTTCTCAGGTAAACAAGGAGGAGGCAGATGCTCGATCAGTTTTTGTTGGCAATGTATGA ATCACCCTATCTCATAACATCTTGTTATACAAGTCGTTTCATTTTTTACTTCCTTATTTTTTACTTCAATAACCGTGTTTGTATACTGTTTGAGAGCCCT CGGTACATATTTTATCATCTGTGTTGGAAGTTGGCAAGGATATTTTAAAATTTTGGGGATGTCTCTTAAAACATTTTGCAACCTTCTCTTGTACCCTTCT CTTAGACTCTGCCTGTCTCACTGTAACTCCACTTGCGGTGGTAAGACCACATACATCAATCCTCCCTAGGCCCCTCCCAGTAGAAGGCTCGTGCATTGGG CCATCCATTTTTTGTCACACTGCCCTTTATTTGACATTTGGCAATTCTGAAATTTGAAACTTCTTGCACTTGATTATCACCGAGGAAAGACTTGTTCTCA ATAAAGCTATCTGTTCATTGGCTATCTTCGTTGTCTAGTGATTTGTCCTAGTTTAGAAGCATGTGATAATTCTATTAATTGGTTTCAATAAACTTCGGTT GAATGGATTGAGTTTAAGTATATAGGTTCATTATTGTATTGCATTCTCTTATTATAATATATTTGAAACTGTACATGTTCTGTTCTGGAGTGAATACTGC TAATCTTTGGAGACAGGTTTTGACTTTATGTCGCACAATGATCGCAGGGTTATTCTTATTACCAAGGTTTCATAGTTAGCAGTGGGACGCTTGTACTGTA TTTTGTGGGGGATGAGACATGTGTTTTTTTGCATTCGAATTTTATTGTTGTAAAAAAAGTCAAAAGAATGAGGAGAAAAAACATGAAAGCCTCTGAAAAG AAAAAAAGAAAAACAAATGAGAAAACATTTTACAAAAGAAAAATAGAATGAAAAAAGAAAAGAAAGAGAAAAAAATGACAAAAGAGAGAGAGAGAAAATT ACAAGAAAAAGGAAAAATATAGAGTATGTTGATTAAACTGTGAAGGCATCTCTTGGGGATGGCTGAAACTGGTAAGGCTGATGGTAGAATGTGTTAAAGA TGCTTCAACTGTACTACTGGAGGAGACAGCTTGTGGGTTCTTTTGGAAGAACATTCTGTAAGTGTTGGGAACATATTCTTAGTGATAGAACCCTCTTGTT GATTGCAATGAAGCCTGTGGTACCTCTGTTGTGTGTCATTTACCTTTTCTAAGTCCTTTTTATAAATTAAGCATTGCTTTCGTTAATGCCAGGCAACATA GTATTGCAGCCTTCCTCCTTGGGGTAATTTGTCGAGTATAAAAGGTTGTTGTTGTTGTAAATTGCTATGAGGAGGAAACTAGAGTAGAATGCTTGAGGAG TTTCTTTTGAGTTTGAGGAGCTTGTAAAATGATGATAAATGTTAAGAACTCTTTTTTTAGTGGGGTGAATTCCTTTGTTTTGTTATGTATTTGGGATTTG TAAAAACTGTCCTGGGTGATATTTGTGAACCCCAATTTTTACTTTTTTAAGGCTGGGTAGTTGTTTTTGAAATATTGGATTAATATGATAAAAAATATTT ACAGGGACACGAGTCTTGAATGTTTGTGATCTATAGTGGTGTAGTCCAAGAGTCTAGTTTCTTTATATAAATAATAGCCAAGTCATATCTGACCAGCTTC TGGATTAATATGATATGTTGCTCATCTTTGGCATCAAAATCCCTTCAATTGATTCGTTGTGCAGGTTGATTATGCATGCACGCCAGAAGAAGTGCAGCAA CACTTTCAATCCTGTGGTACAGTGAACAGGGTCACTATCCTGACTGACAAGTTTGGCCAGCCTAAAGGTTTTGCTTATGTGGAATTTGTTGAAGTTGAAG CTGTTCAAGAGGCTCTTCTCTTGAATGAATCTGAATTACATGGCCGTCAATTGAAGGTTTTACCCAAGAGAACTAATGTTCCAGGAATGAAACAATATCG TCCTAGGCGCTACAATCCTTACATGGCATATGGCTTCAGGAGACCATATCCTCATCCTCACTTTTACTCCCCTTATGGATATGGGAAGGCTCCTAGGTTT ACTAGGGCAACTCGGTACATGCCCTATTACTAAAAGTTTGCATGGAAGGGTGTTGAAGATATGATGGTGGGTGCATCATGCAGCAATATTGACAATATTT TCTGTTTATTCCTCAGTTCTTGGAAGATGGTTTACAATTGCCGTTGAATACTATGTTAGTGACTATAATTTGTACTTGTGCTTATTATGCTTACACATTA AATTAGTGGATAAAATCAGAGTTATAATCCTGCAAGGTGAGTCATTATAGTTTAATGTTTATACTTGACCAAAGATGTATGCTGCAGAGAGCAGTGAACT AATCTGTCCTCTTTTCCTAGACAGTGCAATGAAAGATGTTAGTTTTGAT BLAST |
Tissue | pods |
Gene name | LI_gene_171890; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_455390
Blastp | - |
---|---|
Blastx | Polyadenylate-binding protein 2 from Arabidopsis with 84% of identity |
Eggnog | Polyadenylate-binding protein(ENOG4111PFV) |
Kegg | Link to kegg annotations (AT5G65260) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020233274.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |