Ll_transcript_453893

• Id Trinity: TRINITY_DN49752_c1_g1_i4
• Name Transcript: Ll_transcript_453893
• Sequence: TAAAAATGATGTCAAAATTCCCTTTCTTTCTCTCTCATCCCCTGCAACAATAGAACTATCACACTCTTCTCTCTCCAAACTTTGCAATACTTTTTGAAAC TTTCACAAACTCACTCTCTTTTTTCACGACCAATCCTTCATATAAGTAAAAAGAATAATTTTGCTTTCTACTTCACTTAAAGCTACAATATCCTTCTCCA TTTCCCTTCTAAGTTTGTGTTTCGGTGACCCTTTTGGCTATTTTCTATGTTTGTGTACCAAAGTTTCAATCTTGATCTTCTCCTTACAACTTCCCAAATT CATCTCCCATTTGGTTTTTAGGGTTTCAACTATTACTGGGTAACATTCAAGTTCATTACTTTCATGGGTTTCCTCCATTTTTCAGTGCGGTGTTTTAAAC TGGTTAAAGGGTAAGGGGTAATAGTGTTGGAAATTTCAGTGGGGTTGTGAAAAAAAAGAGGAATATCAACATTGTCAAAAAGGTTGAAGTCATATGAGTG AAAGTTTCACCAAGTTTCACCAAGTTTCAAAGGAATCTTAAGAGGCGTTGGTGATGGAGGATATTGGGTTGTTTAAGCAAGGTTGGAACTGGCTTTGGTT GCAGAAGGACACCTGCTGCCATGCTCGAACCGCACTGACTTGTTGCAGAGACAAAACTGCTATGTTCATTGAGCGGCATTGGCCTCTCGTCTGCATTGCT TGCTCCAGGTTGGGGAGCTTACTGAAGTTATCATTGATTTTCTGGAAAGACTCTGCTCTGAGGGGGTTTCAGTCGTTCATTAGTTTCGGATCGGTGATGC TTCTGCTTATAATGTGGAGCTGCTTTCTTAGTTTAACGTCGATGTATTGCCTGGTTTACGTGCTTGTTAGTATGGGTGTTGCTGGAGTTGCTGTTCAATA CTTGGGTTATACTCCTGGTATTTTTATTGTCGGGCTCTTTGCCATCCTTATTTTGTGGATGTATGCTAATTTCTGGATAGCAGGAACAATATTCTTAGTT GGAGGTTATTTATTCTCCCTAAACCGCGCTCGTTTGGTGGTGTTAATTGGTACTACATATGCTTTATATAGTGTTCAAGTTCAAGCGGGATGGCTGGGTG TTTTTCTTTCTACGAACCTTGCATTCATATCTAACGACGTTTTGAATTTTCTGCTCCAATGGTTTGATAATGTGAGTGAAAGTTCACATTCTGAACAGCA GCAGCAGCAGTCAGAACCTATTGTAGAAGATGACTTCTCCCAAGAGTGTGAATACTCTACCCCTTCCGATGAATCTGAGAATCTGCATTCATGTAAATCT TCTAGTAAACCTGCTGTTACTGCAACCACAACGGCACCAGTTGTTGATAAGCAGAAAGAGCTTTCTGCTAACAAAGTTGTTATAGAGGAGGCTAGTTCAA TTGATGAAATGAGAAGAATATTGAAGAGTCTGGATCATTATGAAGCCCTTGGATTTGCCCGCTACAAGAAGATTGATGCGGGAGTTTTGAAAAAGGAATA CCGGAAAAAGGCTATGCTTGTGCACCCTGATAAAAATATGGGAAGTTCTTTGGCAAGTGAGTCATTTAAGAAGCTTCAATCTGCATATGAGGTTCTTTCT GACTCTGTGAAGAAGAGTGACTATGATGAGAAATTAAGAAAAGAAGAATCCATGGCTAAAACTATGTGCCAAAAATCTCGTGGTAGTTCACATCAGGATA ATCCTGATTATCGATCCGAAGATTCCAGACGTATACAGTGCACAAAGTGTGGGAATTCACATATTTGGGTGTGCACTAACCGGAGTCAGGCCAAAGCAAG ATGGTGTCAGGTTTGATTTCTTTTCATTTCATCCTGATTATTAAGCGCCTTCCTTTTTCTCTCTGTTCCATGCTCACTTTATCTTAGTTCCGAATTTTAC TACTTATCCGAAAGCAGGACTGCTGTCAGTTTCATCAAGCCAGGGATGGAGATGGATGGGTTGAATATAAAGGGTCTCTGGTTTTTGACAGGCCTCAGAA GGTGGAGATCCCACGCGCTTTCGTTTGTGCGGAGAGCAAAATTTTTGATGTGTCGGAATGGGCTATATGTCAGGGAATGGCTTGTAGGCCTAACACCCAT CGGCCGAGCTTCCATGTAAACATGGTTGGTTTGGACAAAAGCCAGCATTGCAACTCAAGTAGATTCCCATGGGATTTGGATGCTGAAATGATGATGGATG AAGATGAAGAGGCATTTGACTTGTGGCTTCAGCAGGCTCTGGCATCCGGTCTATTTTGCGACACCTCCAAACGCCGGAAGAGCTGGAGTCCATTCAAACT GAGTCAAATGAAAGGGAAGAAGCAATGGCGAAGAACTTCATGCTAGTAGGACGAAAACACGCACGCCATTCATTGCCTTTCCGGAAGGGATTTTGATGGA GCAAACATTTTGTAGAAGAAAAGTGATGGATACTGCTGATATCAAAACAAGCATAAAAAGCTTGCAACACTTACACTAAGGTGCCTTGTTTCATCAAAGA TAGAGAAAAGTGCAAAAACCTCATTGCTCAAATGGTCATTCATGTTTACAGAACATAGCTTGAGCTGGTTTACATTTTATGTGGCTTAGTGTTGCCTTGT TCTTATATCAGAAAGTGCTATTGTTTAGGATTAACAGGAACTACTTTGGTACATTGTACATACTTCTTAATAAAAATTTCAGTATTCCTTTATGTTAACA TGCATCTAAAATAAAGTGATGATGAGTTTGTTTCCCTTTCATTTAATTGTATATGATCATGGTTTCTTATGGATTCAAATTCATATAAAATGTAAGATGC TTTGGGTTGAATACAGAAGCTTGTAGCAGCAGG
• Tissue: pods
• Gene name: LI_gene_171913;
• Additional information: details;

Expression of Ll_transcript_453893

FPKM

• PAB: 0.2
• PNAB: 0.5
• PS1: 1
• PS2: 0.1
• PS3: 0.8
• PW1: 0.8
• PW2: 0.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_453893

• Blastp: Chaperone protein DnaJ from Nitrosomonas with 53.03% of identity
• Blastx: DnaJ homolog subfamily C member 14 from Homo with 31.78% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (Neut_0413)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425625.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;