Ll_transcript_454623

• Id Trinity: TRINITY_DN49764_c0_g1_i14
• Name Transcript: Ll_transcript_454623
• Sequence: TTTTGATTCAAGAACATGCTTGTAAGTACTATGGTTCTAACTTCTAAGCTTCATTTTGTTCTGACTTTTTTTACTTAATGCCCTTTTTGGTTTTTAGTTT TTTCTACCTTACCCCTCATTCCAAATCTGAGAAGGGGTTCTCAAGTTTCAATCTTTGGTTGAATTTCAGTTGTTTAAGTTAAATTATGTGTGTTGACTGT GTTCCATTCATATTGGCCATCTTCTATGTATGAGATGTTCTTTTTGAGTGTGGTTCATTTTTCTTTTTCATAGGCATACATGTTAATGGTTATTGAAGTT CCATTCTATTTGATCTCATAAACTTAAGCATTCTCATTTCAGATTTCTTTTGACTAGGTACACTCTTTGATGTTCTTAGTTTTTTTATGTGTCATTGTTT ACTTGAGTCAATGTACAATCTGTTTTAACTCCTCAATTTTCACCGATTGATTAGCACTAATTAATTGCTTTTGCTATGAATTTTTTCACTTTTCTATTCC ATTTCTTATTTCAAAAATGTTTGTAAGCTCTATCTTAATTCTGAAGTGAATTATTTGCTCAAATAAGGAACTCTTCATATCTAATGATTATGCTTGATTC TCCTCTTCTCAATCTCTCTCATAATTCTTAACCAGTGATACATTCTGGTGATTAATAATTAGTTTTATAGAATATATTCTGAGAACAAGTGTGTTGTATT TTCCTTCTTTTGTACCTTGATTTCAGGTGGCATTGCTCTTGCTGCTGGTATTGAGCAATGCTGTTAGAATTGATGCAGATGGTGGACAATGTGGTTCAAA TCCAACACTAGATCCAAGACCACACAGTGTTTCAATTTTGGAGTTTGGTGCAGTTGGAGATGGTAAAACACTAAACACTCTTGCATTTCAGAATGCCATC TTCTATCTCAAGTCATTTGCTGACAAGGGTGGAGCTCAGCTTTATGTACCACCCGGAAACTGGCTCACTGGTAGTTTCAATCTCACCAGTCATCTTACCC TCTTTTTGGAAAAAGGTGCTGTCATTATTGGATCTCAGGATCCATCTCATTGGGATGTTATTGAACCATTACCTTCTTATGGCCGAGGCCTTGAAGTTCC CGGTGGAAGATATCAGAGTTTGATAAATGGACATATGCTACATGATGTGGTCATAACAGGTAATAATGGAACCATCGATGGAGTCGGATCGGTTTGGTGG GAGTTGTTTGCCTCTCATTCCTTGAACTATAGCCGACCTCATCTAGTTGAAATTGTAGCATCTGAATTTGTGGTAGTTTCAAATCTTACATTCTTGAATG CCCCTGCATATAGCATCCACCCAGTTTATTGCAGCCATGTACATATTAAAAATGTTTCAATCTCTGCTCCTCCAGAATCCCCTTATACTGTTGGTATAGT ACCAGATTCTTCAGATAGTGTTTGTATTGAAGATTGTGTTGTAACCATGGGATATGATGCAATTGCCTTAAAAAGTGGCTGGGATGAGTATGGTATTGCT TATGGCAAACCCACTGAGAATGTACACATCAGAAAGGTGAATCTGAAAGCATTTTCCGGCTCTAGTTTAGCATTTGGCAGCGAAATGTCTGGAGGTATTT CAAATGTTCTTGTGGAGGATGTTCATATTTTCAACTCGAATAGCGGCATCGAGTTCAGAACCACCAAAGGAAGAGGTGGTTATATGAAAGATATTTTTAT GTCAGACATACAAATGGAGAATGTCTATACAGCAATTGCAGCCACAGGCCATTATGGCTCTCACCCCGATGACAAATTTGATCGAAATGCACTACCACTT TTAGACCACATTACCGTGAAGGATGTTACTGGTACAAACATCACCAATGCTGGAAGTTTTGTTGGAATAGAAGAATCTCCTTTTACAAATATATGCCTTT CCAATATAACCTTGTCTACCAATTCAGTTTCTACTATTACTTGGGAATGTTCAAATGTCTCGGGATTTTCGGACTCCGTGTTTCCAAAACCATGTCCAGA CCTTGAGAGCCCTTCAAATTCTTCTTCATCATGTTTTCCCTACTTGCTGAGTATCACTGAAAGAAAAACTGCAGTGCTGTGATTATCATTTCTCAATAGA AGATTCAATATTCTTGAGTACATTGCTTGAAAAAACGAGCAGCGAATTGCAAGTGAAGATTAGGTCTCATTCTTTTCAATAAGACACTTGTCCGGATTCT TTTTTACCACTTAGATTTCCATTCTTCTATTTTGCTATCAGCACAATATTTGTACAGGTTTATTTCTTCATTCATGTGTAAGGAAATTTTGGTTGTGTCA CCACAGGAGAACAAAAAAAAAAGATAGCTCTTTGCAATAGTCCATTGTGACTTCACTGTAAACTGTGTAGTTGATTTGGTTAATACTTCAATTGATGGAA ATTTCAACTTTATGGCCATTAAAAT
• Tissue: pods
• Gene name: LI_gene_172014;
• Additional information: details;

Expression of Ll_transcript_454623

FPKM

• PAB: 0
• PNAB: 1.7
• PS1: 0
• PS2: 0.3
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454623

• Blastp: Probable polygalacturonase from Vitis with 44.41% of identity
• Blastx: Probable polygalacturonase from Vitis with 49.75% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419433.1)
• Pfam: Glycosyl hydrolases family 28 (PF00295.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;