Ll_transcript_454611

• Id Trinity: TRINITY_DN49764_c0_g1_i5
• Name Transcript: Ll_transcript_454611
• Sequence: TTTTGATTCAAGAACATGCTTGTAAGTACTATGGTTCTAACTTCTAAGCTTCATTTTGTTCTGACTTTTTTTACTTAATGCCCTTTTTGGTTTTTAGTTT TTTCTACCTTACCCCTCATTCCAAATCTGAGAAGGGGTTCTCAAGTTTCAATCTTTGGTTGAATTTCAGTTGTTTAAGTTAAATTATGTGTGTTGACTGT GTTCCATTCATATTGGCCATCTTCTATGTATGAGATGTTCTTTTTGAGTGTGGTTCATTTTTCTTTTTCATAGGCATACATGTTAATGGTTATTGAAGTT CCATTCTATTTGATCTCATAAACTTAAGCATTCTCATTTCAGATTTCTTTTGACTAGGTACACTCTTTGATGTTCTTAGTTTTTTTATGTGTCATTGTTT ACTTGAGTCAATGTACAATCTGTTTTAACTCCTCAATTTTCACCGATTGATTAGCACTAATTAATTGCTTTTGCTATGAATTTTTTCACTTTTCTATTCC ATTTCTTATTTCAAAAATGTTTGTAAGCTCTATCTTAATTCTGAAGTGAATTATTTGCTCAAATAAGGAACTCTTCATATCTAATGATTATGCTTGATTC TCCTCTTCTCAATCTCTCTCATAATTCTTAACCAGTGATACATTCTGGTGATTAATAATTAGTTTTATAGAATATATTCTGAGAACAAGTGTGTTGTATT TTCCTTCTTTTGTACCTTGATTTCAGGTGGCATTGCTCTTGCTGCTGGTATTGAGCAATGCTGTTAGAATTGATGCAGATGGTGGACAATGTGGTTCAAA TCCAACACTAGATCCAAGACCACACAGTGTTTCAATTTTGGAGTTTGGTGCAGTTGGAGATGGTAAAACACTAAACACTCTTGCATTTCAGAATGCCATC TTCTATCTCAAGTCATTTGCTGACAAGGGTGGAGCTCAGCTTTATGTACCACCCGGAAACTGGCTCACTGGTAGTTTCAATCTCACCAGTCATCTTACCC TCTTTTTGGAAAAAGGTGCTGTCATTATTGGATCTCAGGATCCATCTCATTGGGATGTTATTGAACCATTACCTTCTTATGGCCGAGGCCTTGAAGTTCC CGGTGGAAGATATCAGAGTTTGATAAATGGACATATGCTACATGATGTGGTCATAACAGGTAATAATGGAACCATCGATGGAGTCGGATCGGTTTGGTGG GAGTTGTTTGCCTCTCATTCCTTGAACTATAGCCGACCTCATCTAGTTGAAATTGTAGCATCTGAATTTGTGGTAGTTTCAAATCTTACATTCTTGAATG CCCCTGCATATAGCATCCACCCAGTTTATTGCAGCCATGTACATATTCAAAATGTTTCAATCTCTTCTCCGCCGGAATCTCCTTGTACTGTTGGTATAGT ACCAGATTCTTCGGATAGTGTTTGTATAGAAGATTGTGTTGTAACTATGGGATATGATGCAATTGCCCTTAAAAGTGGCTGGGATGAATATGGCATTGCT TATGGCAGGCCCACTGAGAATGTACACATCAGAAAGGTGTATCTTGAAGCATTTTCTGGCTCTACTTTAGCATTTGGCAGTGACATGTCTGGGGGTATTT CAAATGTTCTCGTTGAGCATGCTCATCTTTTCAACTCAAATAGTGGCGTTGAGTTCAGAACCATCAAAGGAAGAGGTGGTTATATGAAAGATATTGTTAT GTCAGACATACAAATTGAGAATGTTCATACCGCAATCGCTGCCACGGGCCATTGTGGCTCTCATCCTGATGACAAATTTGATCCAAATGCTCTTCCACTT TTGGATCACATCACCTTGAAGGATATTAGTGGTACTAACATTACCATTGCAGGAAGTTTTGTTGGAATAGAAGAATCTCCTTTTACTAACATATGCCTTT CCAATATAACCTTGTCTACCAATTCTGTTTCTGCTATTACTTGGAAATGCTCAAATGTGTCTGGCTTTTCGGACTCCGTGTCTCCAAAACCCTGTCCAGA CCTTGAGAACCCTTCAAATTATTCCTCATCATGTTTCTCCTACTTGATGAGTATCACTGAAAGAAATACTGCAGTGCTGTGATTATACTTTCTCAAAAGA AGATTCATATTCTTGAGAAGCTTGTCAATGAAAACAGGAACAGCCACTTGCAAGTGAAGATTAGGCTCCATTCTTTTCATTAAGATACTTGTTCGGATTT CTTTCATCACTTGCATTCTTGCATGTTGCAATCAGCACACATTATTTGTACAGTATCATTTTTCATTCATGTGTATGGAAGTTTTGATAGTGCCACCACA GAACTCAAAATTTGATTGTTTTTGCATTAGTCCACTGTGATTTCACTGTAAAGCATGTAGTGGATTTGAGTGATACTTCAACTAAAGGAAATTTCAACTT TCTGCCATAAGTATGTCCATGTTTTATTACTTAAGGTAATGTCAAAGTTGAAAAATCATTACCTCTTAAAAGGATTATAGAATCTCAGTTCAGTTCAGAC TCTGTCAGTGATATATGCCAG
• Tissue: pods
• Gene name: LI_gene_172014;
• Additional information: details;

Expression of Ll_transcript_454611

FPKM

• PAB: 0
• PNAB: 2.5
• PS1: 0.5
• PS2: 0
• PS3: 0.7
• PW1: 1.1
• PW2: 0.8
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454611

• Blastp: Probable polygalacturonase from Vitis with 43.49% of identity
• Blastx: Probable polygalacturonase from Vitis with 48.37% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425838.1)
• Pfam: Glycosyl hydrolases family 28 (PF00295.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;