Ll_transcript_454719

• Id Trinity: TRINITY_DN49765_c1_g1_i2
• Name Transcript: Ll_transcript_454719
• Sequence: CACACACTATCCTCATCTTATGAACAAAGTTGAAATTCCATGGCATGAAGGGAAATGAGTAGCAGTGAAGAAAATCAAGAATAAAAATGGTTCATCAGAG TCACATTCTCTCTTATAACGTTATTACACTCTCTTCTTTTTCTTATACTCCTCCAATACGACGTCGTTTCATTACAACCGCTGCTCCTCCTAGAACAACA ACCAATCTCAGGCGTCTCACCTCTCGCATCGTTCAACTCACGCGCCGCAAACAGCTTCGTCAGATATTGGAAGAGGTTGAGGATGCAAAGAGAGATTATG GGCGGGTGAACACAATAGTGATGAATGCAGTGATGGAGGCATGTGTTCGTTGCGGTGACATTGACTTAGCACTTAAGATATTTGATGAGATGAAAAGCCC ACACCAGGGTTGTGGTGTCGATACTGTTACCTATGCCACACTTTTGAAGGGGTTAGGTGAGGCACGAAGAATCGATGAAGCTTTTCAATTGCTTGAATCT GTGGAAAATGGTATGGCCACAGGAAGCCCAAAGCTGTCAGCTGGATTGATCTTTGGCCTGCTAAATGCCTTAATTGAAGCTGGAGACTTGCGTCGTGCAA ATGGCCTCCTTGCACGTTATGGTTTTGTCCTTCGTGAAGATGGCAATTTTTCAATCGCAGTATACAACTTACTAATGAAGGGGTATATAAAATCAGGCTG CCCGCACACTGCAATAAACATGATCACTGAAATACTACATGAAGGAATAACGCCTGACAGGCTCACATATAATACACTAATTTTAGCATGCATGAAGAGT GGAAAGTTGGATACTGCAATGCAATTTTTTGAGGAAATGAAGGGAGAAGCACAGAAATCCATTAATGATGATCTGGTTCCAGATATTGTCACATATACGA CATTGCTCAAGGGTTTTGGCCAGGCAAAGGATCTTACTTCAGTTCTGAAAATAGTGATGGAAATGAAATCATGTCATGAGTTGTACATTGATAGAACTGC TTACACTGCAATAGTTGATGCTTTACTGAAATGTGGCGCATTTATGGGTGTGCTGTTGTTTAATTTAAAGTTTCTTAGAAAATAAATAATATATGGACGT ATGATAGTTGGAATAAGATATTTCTGAGGAATGCTAATACTGGTATTAAAGGGCTCTCACGGTCTATTGGATTGAAGAGTCAAATTTTGTTCAACTTCTG ATGTGTATTTTGTTGTTAATGCCAATCTGTTCTTATTAAGCAATTATCTAGTTAGAGGTGAGAATTTTGTTTGTAACTTATGGTAATAGATGCTGAAGGC GTATTTCTTAACAAAAAAAAGTCAAACTGAAGCATAAGGCAACATAAAAATTGGAGTCCTGTCCTTATAAGTATGTATATGTCACAAAGGAGAACTATTA AACTAAAAAAGGAAGAAAAAGCTACTTCTTTTCTTGATATTTGGAAAATGTCAGCCAGTCTGGCTTGATGGACTTATTTCAACTGCTAATGCTTTCTGCC ATATAGTTTGGGTCAATATTCAATATTCTTCGCCTCTCTCATTCTTCTCCTAATTGAGTCATCTTTGGGAACTTAGGTGCTCTGTGTATATTTGGAGAAA TACTGAAGCTGTCTGGTTGGAGACCAGAATTGAGGCCAAAGCCTCACCTCTATCTTTCCATGATGCGTGCCTTTGCTTTTGGAGGGGATTATGATCTAGT TAAAAAATTGTATAAACGGATTTGGCCAGATTCTGCAGGAACTATCTTACCAGTTGCCCAAGAAGAAGCTGATCACCTTCTCATGGAAGCAGCACTAAAT GCCGGCCAGGTTGATGTTGCTATTAATACTCTTACCGGTATTATTTCAAGATGGAAGGGCATATCATGGACAAGTCGTGGAGGCCTGGTTGCTATGCGTA TTGAAGCCATGTTGGGGTTCTCAAAGTCTGTATTCAGTCCTTTCTTACTTCCTGAGGTTTCACCTTCTGAACCGGTTGAGAGTTTCATGATACCATTTGA AGCAACACAGCCACTACAAGGTACCATAAAGCTGGAGAATGTGGCTGCCCGTTTCATTAATGATGCAGTTGTTCCAATTGTAGATGAGTGGGGCAGCTGT ATCGGGATCTTGCACCGTGAAGACTGCAATCAGGTATTTTTAGTTATCTTGTGACATCGACTTTGTGAGATTACCATTTCGTTACATAATGTTGTATTCT ACAAACCTCCGACATGCTTCAATTGATGAACTTACTCCCAGGTAATTGACATGGAGTGAACCTAATATGATTGTGTGAAACTTATTCTACTATATCTTTC TTGGAGCATTACATTTACTTCCTCAGTTTCATTATGAAGCACGGTCTTTAAGGCAGACATCAGACATGACATTGAGTATGGACACCCATACAAGGACAAT GTCAATATAGGGTAGGATAGAAAACTATATAATGTCAGCTAGGTGTCTGAGCTGACAAAGTATGGTTTTTTATTGGATACTTGGGGAATGGTGTTTACAC GTGTCCGTGTGGTACACCCCAATTAAGAGAATTTTCTGTGCTTCCTAGACAAATAACTTACTTATCCATGTACATGTATGGACATGGTTGCTTTTATATT TATCGGGTTTTTGCCTGTGTTGAGGTATGTCAATAATATTACACAACATGTTTTCTACACCAAAGATATTACACGTGTTTTCTACACCAATGAAATTATA ATGTTTTCATACATCAACGATATTACACATGTTTTCATCAACTAGTATCTGGGACAACCCTTGACACATCTCAAGATCCAAACCACTTAATTCCAATGAG AGGCTCAAGGATATATTGAACATAGTATTATGAGATAATTTAATTGCATGATGTGTCTTCAATACTGGTTTTAATTTGCATGGGCTTACCCTGATGTGGT GGTAGTTTAACATATGGATTCATAGTAGGTACTGGTTTAATTAGTTTCTTCCAAAATGTTATTTTTGGGGATAGCAATATCATGCTTTGATTGTGCTATT TCCATCCCAAGAAAATATCTTAATCTGTCCAAGTCCTTTATTTCAAAATTATTGACCAAGTGTCCCATATCTTGAATGTCTTTATGATCACTGTTTATAT AATTATGATGCAACCCTTTTCAACTCTACACTACTGTTTTAGAAATATTGGTGTGCTATTTGCCTGCTCCTGTATGCCATTGTGTTGTAATATCCACATT TTGTTGGCATGTTTGAGAGCAAAGACACAAAACATAGACATCAATGTTTTAAATTGCGGTTGCGATTGCGGTAACCATTGCGGTTG
• Tissue: pods
• Gene name: LI_gene_172019;
• Additional information: details;

Expression of Ll_transcript_454719

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.4
• PS2: 0.2
• PS3: 0
• PW1: 0.3
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454719

• Blastp: Pentatricopeptide repeat-containing protein At5g10690 from Arabidopsis with 60.84% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g10690 from Arabidopsis with 62.91% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G10690)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447517.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;