Ll_transcript_454725

• Id Trinity: TRINITY_DN49765_c1_g1_i7
• Name Transcript: Ll_transcript_454725
• Sequence: CACACACTATCCTCATCTTATGAACAAAGTTGAAATTCCATGGCATGAAGGGAAATGAGTAGCAGTGAAGAAAATCAAGAATAAAAATGGTTCATCAGAG TCACATTCTCTCTTATAACGTTATTACACTCTCTTCTTTTTCTTATACTCCTCCAATACGACGTCGTTTCATTACAACCGCTGCTCCTCCTAGAACAACA ACCAATCTCAGGCGTCTCACCTCTCGCATCGTTCAACTCACGCGCCGCAAACAGCTTCGTCAGATATTGGAAGAGGTTGAGGATGCAAAGAGAGATTATG GGCGGGTGAACACAATAGTGATGAATGCAGTGATGGAGGCATGTGTTCGTTGCGGTGACATTGACTTAGCACTTAAGATATTTGATGAGATGAAAAGCCC ACACCAGGGTTGTGGTGTCGATACTGTTACCTATGCCACACTTTTGAAGGGGTTAGGTGAGGCACGAAGAATCGATGAAGCTTTTCAATTGCTTGAATCT GTGGAAAATGGTATGGCCACAGGAAGCCCAAAGCTGTCAGCTGGATTGATCTTTGGCCTGCTAAATGCCTTAATTGAAGCTGGAGACTTGCGTCGTGCAA ATGGCCTCCTTGCACGTTATGGTTTTGTCCTTCGTGAAGATGGCAATTTTTCAATCGCAGTATACAACTTACTAATGAAGGGGTATATAAAATCAGGCTG CCCGCACACTGCAATAAACATGATCACTGAAATACTACATGAAGGAATAACGCCTGACAGGCTCACATATAATACACTAATTTTAGCATGCATGAAGAGT GGAAAGTTGGATACTGCAATGCAATTTTTTGAGGAAATGAAGGGAGAAGCACAGAAATCCATTAATGATGATCTGGTTCCAGATATTGTCACATATACGA CATTGCTCAAGGGTTTTGGCCAGGCAAAGGATCTTACTTCAGTTCTGAAAATAGTGATGGAAATGAAATCATGTCATGAGTTGTACATTGATAGAACTGC TTACACTGCAATAGTTGATGCTTTACTGAAATGTGGCGCATTTATGGGTGCTCTGTGTATATTTGGAGAAATACTGAAGCTGTCTGGTTGGAGACCAGAA TTGAGGCCAAAGCCTCACCTCTATCTTTCCATGATGCGTGCCTTTGCTTTTGGAGGGGATTATGATCTAGTTAAAAAATTGTATAAACGGATTTGGCCAG ATTCTGCAGGAACTATCTTACCAGTTGCCCAAGAAGAAGCTGATCACCTTCTCATGGAAGCAGCACTAAATGCCGGCCAGGTTGATGTTGCTATTAATAC TCTTACCGGTATTATTTCAAGATGGAAGGGCATATCATGGACAAGTCGTGGAGGCCTGGTTGCTATGCGTATTGAAGCCATGTTGGGGTTCTCAAAGTCT GTATTCAGTCCTTTCTTACTTCCTGAGGTTTCACCTTCTGAACCGGTTGAGAGTTTCATGATACCATTTGAAGCAACACAGCCACTACAAGGTACCATAA AGCTGGAGAATGTGGCTGCCCGTTTCATTAATGATGCAGTTGTTCCAATTGTAGATGAGTGGGGCAGCTGTATCGGGATCTTGCACCGTGAAGACTGCAA TCAGCTTGATGCATCAGTTTCAACAATGATGAGAAGCCCACCTCCTTGTGTAACAATTTCAACATCTGTTGGTCATGTAGTTGATTTAATTTTGGAGAAG AGGTACCCAATGGTCATCATTGTAAAATACACTGACTCATATGCTACTACTTCATACAGTTCTAGAGCTGTTGGAGTTTTTACATTACAACAATTGAATA GGCTTATAACACCTGTTTCTGTATCTGAATCAAAAGGGACACACATTTCTCTCCACCAAAGATAATAATATAATGTGTTTAGCTAATACCAAAATCTGGT TTTTGTTTTTTTGTGATAGTGATAAAGGAATTGATTTAAAAAGTATATATAAATTATGGCATTTAAT
• Tissue: pods
• Gene name: LI_gene_172019;
• Additional information: details;

Expression of Ll_transcript_454725

FPKM

• PAB: 3.8
• PNAB: 5.1
• PS1: 5.3
• PS2: 3.2
• PS3: 4.3
• PW1: 4
• PW2: 4.2
• PW3: 4.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454725

• Blastp: Pentatricopeptide repeat-containing protein At5g10690 from Arabidopsis with 61.25% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g10690 from Arabidopsis with 62.48% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G10690)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447517.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;