Ll_transcript_454216

• Id Trinity: TRINITY_DN49766_c3_g1_i11
• Name Transcript: Ll_transcript_454216
• Sequence: CTTTTTCTCCATTTCTGACCCTAGTACCCTACTCCTCACGTCCACAAAGGAAAGAGTTCCTTTCTCTCTTTAATCTTTATCTATCTCGCCCACTCCACCC CTAGAGTATAGCCCCTCAAGTGTCATTTTCTCACATATACTTCACACAAAAGAAACAACCATTCACTTCATATTACCACGTACCTTGTCATTTCTTTCCC CTCTCTCTCTCTCTCTTTTTGCCGTCTCCTCTCAATCTCAAATTTCTTCTCTGCAACTACTCCATCATAATTGATTGAATGCTTGAAACCCCATCACACA CACCTTCACAAAATCTAACCTTTTACCTTTACAACCTTACCTTATCCTTGAAATTTTTCATACCCTCCTATATATATATATATATCATAAGAAGGAATAA AATTAGGAGGGACACAAAGAAGAGAACACAAAGCAAAACAGAAAGGAAGGTTAGTGTGTTGAATTAACCAAGGATGGAACTATTCCCAGCACAACCAGAT TTATCATTACAAATCAGCCCTCCAAACACTGAACCGACATCAACTTGGAAGAGAAGTACAACAGATGAAGAAGTGGATTTGGGTTTTTGGAAGAGAGCTT TGGATTCTAGAAAGTCCTTATCATCTTCAATGCCCAAAACTGATGCCACTTCTTTTGACCTATCCCTCTCTTATCCAACAATGGCTTCTTCTAACACCAA CAACAATATGAACCCCTTCGAAAACAAAAACATTAATAATGCAAACACCACCAAAAACAACAATATCAACAACCCTTTTCTATCATTTCATCAAAATCAC TACTTTCACCAACACCATCCACTAGTCTTCCAGCCACAACAACAGCAGCAGCAGCACCAAAGCTTAAGCCAAGAGCTTGGATTTCTGAGACCCATAAGAG GAATTCCAGTGTACCAAAACCCTCCTCCTACTATGACATTTCCACAACTTCAACATCATCGACATCTTCTAGATGTTTCTTCCACTGCCCCTTCACCTAT TTCCAATACAACCACTACATCACCTTTTCATCATTCTCAAGCTTTGATGCGGTCAAGGTTCTTGTCACGCTTCCCTGCGAAGCGAAGCATGAGGGCTCCT CGGATGCGTTGGACAACTACACTCCATGCTCGCTTTGTTCATGCTGTTGAGCTCTTAGGTGGCCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTGA TGGATGTGAAGGATCTTACTTTAGCACATGTTAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCAGCTGCTTCTTCAGGGCAATC GGATGTCTACGATAATGGATCATCTGGAGATAATTCCGATGACATAATGTTTGACATTAACTCTTCAAGAAGATCTGATCTATCCATTAAGCAGGGAAAG CCAAGTGTTAATCAAGATAAAGAATATCATGGGCTCTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCATGGCAAACCAAAGACTGATTCTGTTAGAAACG TGCCTTCTCTTGAGAAGAATACGGATCCAAAGTGCTTAAGCTATGAGAGAATATCAGATAGAAGCTCATCTTCAAACCATTCAGGATCAAGCCCTAAAAA GACTAATTTGGATTTGGAATTCACCTTGGGCCAACCACTTAGAAATCTGAAGGAGCTAGAGTGCTGGAATTAGAATCAGGAACCCACTGAGAAAATCAAA GAAAGGGAAAGCTAATTAAAGAACACAAAAGAGAAAGAAAAAAAGCAAAAAGAGCTAAAGAAACATAAGGAGACAAGAAAGACAGAAACCAACAAAAGGA GGAAGTGGGGGAAAAAGCAATGCCTTCCTATCAGAGCTCTTCTGTGATCCAAATCAACATATTTTATTTTCTTGGTAAATATATGAAATCTAATTGATTT GTATGTTTTCCAAATGTGAGAGAGAAAGAAAGAGACATAAAAAAGAGAGGGTTGAGGACTGAGGTAAGCTTTAGCTATATATATTAAAGTATGAAGTGAT CCTTGGTAATTGTAATGGAGCAATTAATTTACATTTATGAAATATTTTTGTTATTTTTACCAAACAAGTTGGATTCCTAATACTCCTATGTTCTATCCTA GGCAGACTCATATATGCTTTACTCTTCAAGAATAAAATAATCGGTGTAATATTTATGCAATATAATG
• Tissue: pods
• Gene name: LI_gene_172034;
• Additional information: details;

Expression of Ll_transcript_454216

FPKM

• PAB: 8.9
• PNAB: 9.2
• PS1: 5.3
• PS2: 6.1
• PS3: 8
• PW1: 3.1
• PW2: 3.2
• PW3: 5.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454216

• Blastp: Probable transcription factor KAN2 from Arabidopsis with 68.63% of identity
• Blastx: Probable transcription factor KAN2 from Arabidopsis with 70.93% of identity
• Eggnog: Transcription factor(ENOG410YB3T)
• Kegg: Link to kegg annotations (AT1G32240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422481.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;