Id Trinity | TRINITY_DN49766_c3_g1_i6 |
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Name Transcript | Ll_transcript_454210 |
Sequence | CTTCTTTCTCTCCCACCACCACCAAGAGTATAGCTCCTCAAGTGTCATTTTCTCACATATACTTCATACAAGAGAAACACCTATTCATCCCTTCACATAC CTTGTCATTTCTTTCTTCTCTCTCTCTCTTTGCCATCTCCTCTCAATCACAAATCTCTCCTTTGTACTACTCTCTCTGAATTCATTGAATGCTTAAAACT CCTTTAACAAAATCTAATTAAGTACCCTTACTTTGCACTTCACTGAACCATCCCTTCATCTCAAATCTCAATATATATAGTTTCCTTCCATGTCCTTGAA AATTTCCATACCCTCTTTATATTTATATATTGCAGAATAAGGAAGAGAACACAAGGCAAATCAGGAAGGAAACTTGGTTTGGTGAGTTTCAAAGTTTGCT GTATTGTTATGGAGCTATTCCCAGCACAACCAGATTTGTCCTTACAAATCAGCCCTCCAAACACCAAACCCACATCAAGTTGGAGGAGAAGTACTACAAC AGATGAAGAAGTGGATTTGGGGTTTTGGAAGAGAGCATTGGATTCTAGAAACTCATTATCATCATCAATGCCTAAAACTAATGCCATATCTTTTGACCTC TCCCTCTCCAATCCAACAAGGGCTTCTTCAAACACCAACACCTCTAACAGTCTCATTCACCACTTCCAAAACACTAATAATGCAAACACCAACAACAACA ATCCCTTCCAATCATTTCATCAAAATCATTACTTTCACCAGCAACAACAACAACAGCATCCACTGCTCTTCCAGCCACAAAAACAGCACCAAAGCCTAAG CCAAGAGCTTGGTTTTCTGCGACCCATAAGAGGAATCCCAGTGTACCAAAACCCAGCTCCTACTATGGCATTTCCTCAACTTCAACATCAACAATATCAT AACCTTACAGACACTTCTTCCAAAACCATTTCACCTATTTCCAACACAGCTACTACATCATCCCCTTTTCATCATTCTCAGGTTTTGATGCGGTCGAGGT TCTTGTCACGGTTCCCTGCCAAGCGAAGCATGAGGGCTCCTAGGATGCGTTGGACAACTACACTCCATGCTCGCTTTGTTCACGCTGTTGAGCTCTTAGG TGGCCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTCAAGTCTCATTTACAGTCCTTGGAGGTG AAGTTGGTACAATTCTGATTGGTTGTTCTTGTTTTCAATGGTACTTGCTATACGTACTTTGGAATAAAAGTTAAAATTAAAATCTGTATGATGCATTACA TTACAAATTACAATTACAGGAAGGAGTTAAGTCATGTATATATGTTTCAAATTCCAAGGGTTTCCATACAGAGGGCCTTTCAAATCCTTAGCACTTCTTT TTCTATTAGATCCTGCTGCCTCTGCTTCTGCTTCTGCAAGCTAATAAACAGCTTTTGCTTGGAAGAATGAACCATCTAAGTTAAAGGAAAATAATTCAAT AGAGAGAGAAAGATCAGAGGTACTTATCGATTTCTGAAAACAAGTAAGACAAAGTCCCTCTAATTCAAAATGACACACAGAACCTCATAGTTTAGTCCAT TGCTAAAAAATAAATTAAAAATGTAAAATACCAGATTGTATTAAAAAAGAGTAATGTTATTATTCATGTAAACATATCTCATAGTTATTAGAAATTGTTT TATTTGTTGGACACTTTCACTCAAATTCTTCCTAGAATGTAGAATAATCGTTAAAGAAAGATATGGTAAACAAGTACGTACCGAACACCATCATTTCTCA ATGATATCCTCTCCTCCTCAGATATGGGTCTCTTTACCATGCTAGCTTTAACCATGGTTAGTCACATGTTTCTATGCATATACATATTACCATGATCATA AATGCTTCTGTATTACAACTTGTACATTTCTGCATATCAATTTAATACTTCAAAGTTACCCTACTCATTTATATATTCTTCTTCCTCTACAC BLAST |
Tissue | pods |
Gene name | LI_gene_172034; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_454210
Blastp | Probable transcription factor KAN2 from Arabidopsis with 52.48% of identity |
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Blastx | Probable transcription factor KAN2 from Arabidopsis with 83.53% of identity |
Eggnog | Transcription factor(ENOG410YB3T) |
Kegg | Link to kegg annotations (AT1G32240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420421.1) |
Pfam | Myb-like DNA-binding domain (PF00249.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |