| Id Trinity | TRINITY_DN49767_c0_g2_i10 |
|---|---|
| Name Transcript | Ll_transcript_454375 |
| Sequence | AAAAAATAAAACTTAAAAGCCAATGGTCACGTTGGCCAAAATTCCACCGCAAGTCTATACGTCCCCTTCCTCGGTAACCAGTGGAACAATCACGTAAGAA TAGGACCCCACCATCACTACACTTTACGTACCAGAAAACCTCCGCCAAGGAGTTTTGTGGATGAGATTCGAGCATAAAAGCTACTCCAAAATAGAAATAA AAAAAATAATAAATCCACAACAAATTATCGTGGCTGAGATTTCTCCTCACTCCATTGCAGTTCCTTCTACTTCAGTTCAGCTAAATTTCTATTCTCTTCT GGTTTTGTTTCACTTCGCGTTTCTTATTCTTACTCTTCTCTCTACCTTCTTCCGATTCAGATTTTTTATCCGTTTCCTAGTTGCCGGAAATGTCCCCTCC GGCGAGTGTCCACTGAGTTCGCATGCATCATCTTCCTCTTCCATGGATTTATTTCGAGGTTTTGAAGCAGTGAAGTTCGTTTTGTATCATCACCTTACAA TAACATTCTGGTTACTATCACTTTCACCACGACGGCTTTACTGTTCAGTGTGCTCCAAGTAACTAAAAATGAACGAAGGTATTTGTATTTCTTGTATCCG CTACTCGTCCGAGAAGATCTGAAGCAACGCTAGCAGCTCATGTCCTAGGATGGAAGCATACTCTTCTGGTGAAGAAATAGTTGTTAAGGCACGAAAACCA TATACAATCACAAAGCAAAGAGAAAGATGGACGGAGGAAGAACACAATAGGTTTCTACAAGCTTTAAAGCTTTATGGACGAGCATGGCAGCGCATAGAAG GTAATAGTTTGTTCATCACTAATACTTGAACATTGTTTCTTTTTCATTTCTTCAGATGACATTCATTTGGGACTGCTGAATTGCTAACTAATATTCACAT TCAAACTCATACTTATGAAACATCTTATTAGAAAATGACATGAACTGTCCTTTACATTTGATTAACTTTTAATTTGAACTGTCTTTTGTTTTTTCTCCCT TGGTCTTGTCTGCCCCTTTTTTCTGTTTTACTTTTACCCTGCAGAACATATCGGAACAAAGACTGCCGTGCAAATCAGGAGCCATGCACAAAAGTTCTTT ACAAAGGCATAGAGGAAATCCTCTTCTTTTTTGTTACATGCACTCACACAACGTAAGAGAAAGTTATCAATTCATGTATTACCAAGAGCTACAGAAAGAC CGAATTTTTTTATCATTGGAGAAAGAGGCCCTTGTTAAGGGTTCATCAATTGGACAAGCTCTTGACATAGACATCCCCCCTCCACGGCCCAAAAGAAAAC CAAGCAATCCTTATCCTCGGAAGACCAATGTGGGTGCCCCAACATATCAGGGTGGAGAAAGGGATGAAAAACTCATTCCAGTTGAATCTTCCCATGTTAA ACAGACACTGGACTTTGAAAAAGTTCCACTTCTAGAGAAATATAATGACGGCAAAAGGCAAACACATGGAAAGGATAATAAGGATGAGAACTGCTCAAAA GTATTTCCTGTTCTCCAGGAGGCACCATGTTCATCATCTTCAGGAAACAAGAGCTCAATATCAATGTCAGCGCCACTGAGAAATTCATGCGCATTAAGGG AGATTATATATTCAGTGAAAGAGGCAATATCGCAAGATGAAACAAATGAATCTCTTGTCACTATTGAACCTGAAAATCGGAAGCTGGAGGTAGATGATGG GAAACAGACTAATGGTACCATTAAAGAGTCCCAGTTGGAGAATTGTGATGCTTCACAAGTGAAATTGGTTCAATGTGAGAAAACAGATGGTCTTAATTGC ACTTTAACAATAGATGGAATGCAAGGAAATCAGAGTTATCCGAAACATGTTACCGTTCATGTTGTTGATGGGAACCTTGGAACAAGTACTAAAAACCCAT CCCTAGATATGTTGTTCCGGGATTCCATGTTTCAACCAATTGGAAAGGTTAACGGGCAGCCTAATCTTTTCACAAATTCAACTGCATCAAACATAAGCGA AAATCAAAATAACACAGCACCATCTTCTATTCATCACCCATATTTTCCTTATCCTCCCTTTGCACAACATAATCGAGATGATTGCCAACCTTTTCTTCAT CTGTCCACCACATTTTCAAGTCTAACTGTCTCTACCTTGCTGCAAAACCCAGCAGCCCATGCTGCAGCAAGTTTGCCTGCTACATTTTGCCCCTATGAAA ATGCAGAAACTTCAGCAAATGCTCCTGCATGCTCTCAAGAAAGTTTTCTATCCAGACAAAGTGGCTCCCCTCCCAATGTGGAGGCTATTGCAGCTGCTAC TGTAGCTGCAGCAACTGCATGGTGGGCTGCCCATGGATTGCTTCCAGTATGTGCTCCTCTCTATACTGCTTTTGTCTGTCCTACAGCATCAATGACTGCA GTTCCATCAATGAATATTGATGAAGCAACTGCACCAAACCCAGAGCTAGAAGAGAGTACTCTCCAAAATCCTCCTTTGCAACATCAGATACTGGATCCAG AACACTCAGAAGCTCAACAAGGTCAACATTCAGCTTCTAAGCCATTGACTGTTATTTCATCAGATTCTAAAGAGAATGGAGATGGCAGTTTAAATACTTC ATTAAAGGCTACCACCACTGATCATGAAATGGATACAACAATTTCCGAGAACTTTGATTCTGACAAAACAAAGATCAGAAAACAGGTTGATTGTTCCTCA TGTGGTTCCAATACCACCTCTAGCAGCGATGTCGAGACTGATGCATTAGAGAAGAATGGGAAAGGGAATGAACAGCCTGAAGCACCTGAACCTGATGCTA ACCATTTAATCACAGAGTCTAGTAATCATCGTAGTAGAAGCATTGTCAACCTTACTGATCCTTGGAAGGAGGTGTCTGAAGAGGGGCGAATGGCCTTTAG GGCTCTTTTCTCCAGAGAGGTGTTGCCGCAGAGCTTCTCACAGCATGATTTAAAAAATAAGGATCATCAAATGGACAACATTAAGGATAACAAGCAAAAC GTAGATAACAAATATGAAGACCTTAACAGCAAGGAATGGTGTTCTGATTGTGAAGGAATGCAGAAAAATCTGCCATTTCTAGAAAATGAGGAGAGGCTGC TAACCGTGGGGCTTGGACAAGAAAAGCTCAAGACTCGCCGAACAGGCTTTATACCATACAAAAGATGTTCAGTGGAGGCCAAGGAAAACAATGTTGGAAC AAGCAACATCCAAGCTGAAGACAAGGATTCTAAGAGAATACGCTTGGAAGGGGAAGCTTCAATTTGAGGTTTGTTGTTACATATGCATGCAATCTCATAA AGGGAACCTTTGGTTTTTGCATATAATTTCTTAATCCCCTTAAATGGTGTGCCTATTGTTTATTTCTTATTTTGAAGCTCATGAAACTTGTCGTGTAGAG ATGTGTGTACCATGTTAAAATTCTATATATGCTCTTTTACTATCTTGGAGTGATGTTACTGCTATAAAACTCTGCAAAGTTAGATAAGCAGGATACATTA AGAATTGTTTGAACGGTTGAACCTTAAGTAATTGATGATGTATCATTCAGCCACTCCTATTTTACTTTTGACATCTATCTATGAGCTATTCTCCTCTTTT ACAAACTATGCCCCGATTGAACAAATTTTCTCTTACATGATATGCTTGTATGATGTGGCAAGTTACTCTTCATCTTAGCCATCGATTTTTTGGGTGAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_172040; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_454375
| Blastp | Protein LHY from Arabidopsis with 34.57% of identity |
|---|---|
| Blastx | Protein LHY from Arabidopsis with 36.04% of identity |
| Eggnog | Transcription factor(ENOG4111HV1) |
| Kegg | Link to kegg annotations (AT1G01060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461318.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |