Ll_transcript_454365

Id TrinityTRINITY_DN49767_c0_g2_i2
Name TranscriptLl_transcript_454365
SequenceTAGAGGCAGTTATAACTACTTACCATAAATAGTAGTTTTTGTGTATTCTTCATTCATTCAATGGAAAATCAATTTTATCTCATCATGCTTTCTCTCATTT CTTCTTTGGATTTTAAGATGGTATCAGAGCAAAATTTGCTCTGATTCGTCTTCAACCTTTCTCTTCTCTTCTCTCCTTCTTCTTCGCGTTTTTCCCTCTT CCTTCTTCTTCTCTGCAAATCGTGGTTTGCATCATTTCTCTTCTGTTCTTCTTCTCTTCAATTGATTCTCATCAAATGGCGAATCAGAGCTTCGAAGATT ACAATGTGAATCCATCCAATCCCTACTTTCTTCATTCGAATGAAAGTCCTGCGTTGGTTCTTGTTTCACCTCTTCTCGATGGGAAGAATTAGCATTCCTG GTCTAGAGCAATGAAATTAGCTCTTCAATCCAAGAATAAACTCCAATTCATAGATCGTTCAATTCCTCAGCCATCAGTGACTCATCCTCTCTATGCTCAA TGGATAAGGTGCAATACAATGATTTTGTCATGGTTACAACATTCTGTTGAGGAGAAAATAGTGAAATCAATACTCTGGATTGATGTAGCAGCAGATGCAT GGAAGGATCTTCATGATAGATATTCTCAGGGAGATATCTTTCGTGTTGCTGAACTTCTTGAAGAATTTTACAAGGCAAGTCAAGGCAATCAGTCAATTTC TGATTTCTTCACTCAATTGAAAGAAATCTGGGAAGAAATTGACAACTATAGAGCTATAGGCCATTGCAAGTGTGCTGTGCAGTGTGATTGTGGCATAATT GATCTGGTGAAAATGCATAGGGAACAAGACTATGTGATTCGGTTCCTCAAGGGATTGAATGAACAATATTCTCAAGTGAGATCTCAGATAATGCTGGTTG AACCTCTTCCTCCTATTAGCAAAGTCTTCTCAATGTTGGTTCAGCAGGAAAGGCAATTCAGTGTTCCTATACTTTCAGATCTAAAGGCACTAGCAGTTCA GTCTCAAGGAATTCCTCAATCTAGAAATTATAACAGCAACAGAGGCAGAGGAAACAATTTCTTTAGAGGTAGAGGAAAGCCTTTTCAAAACAATGCTGGA AGAGGCAGCAATAATAGGTTTTGCACTCATTGTGAGAGGACTAACCACACTGTGGACACATGCTTTTTGAAGCATGGCTATCCACCTGGATATCATTACA ACAGATCTGATAGAGTTGCTAATGCTGCTAGTGCTTTCCCTATGGAGATGGATTATGGTACAGGAAGCTTGCAATCTCAGAATGATGATGTGTTTACTGC TGAGAAAAGTCACAAGAGCCAAAACTTCACTGATGCTCAATTTCAGTCTATTTTGGAGCTTCTTGAGAAGAGCAAACTGAATACTGGCAGGGTCAACTCA GTTGTGAGCAATAGAGTGGAATCTGTTAATGCTACAAATGCTTCTATCACAGGTAATGGTTCTAGAGATTGGTTGATAGATACTGGTGCTACTGATCACA TTACTTGTGATGTGAGTTGCTTGCTCTACAAGAGATTAGTCTCTCCTGTGACCATCACTTTGCCTAATGGAGACAAAGTCCAGACCACTACTTGTGGCAC TGTCATTCTGTCTCAATCTCTTATCTTAAAAGATGTCCTATATGTTCCTAAGTTTCATGTTAATCTTGTATCTGTGACTAAGTTGACTCACTCACATAAT TGTCATTTAATGATCAATCTTAACTCTTGTGTCATTATGCAGAACAATACCAAGAAGGTGATTGGTATAGCTAGCTTGAGACATGGTTTGTTTGTCATCA GTCCAGTGCAAAGGGATCATTCATGTAATAATGTATCTCAGTCTTGTAATTCTGGTAGTTCCTCTAGTGACTTTAATCTTTGGCATTTAAGGTTTGGTCA TGCTCCTTTATTTTCAATGAAAAGTTTATCTAGTCAGTTTGATTGTATTCCTCCATGTAACAACAAACATGTTCCATGTGATGTCTGTCATGCTTCTAGA CAGAAGAGATTACCTTTTTGTGATAGCAATACTCAATCAAATAAAGTTTTTCAGTTGTTGCATGTTGATATATGGGGTCCTTATTCTACTACTTCTATTC TTGGTCATAATTACTTCCTTACTCTTGTTGATGACTTTACTAGGTTCACTTGGGTGATTATGATGAAAACCAAGAGTGAAACTAGGCAACATATCATTAG CTTTGTTGCCTTGATTGAAAACCAGTTCAGTGTTAAACTTCAGACCATAAGAAGTGATAATGATCCTGAGTTCTTGATGAATGATTTCTTCTCTAATAAA GGAATCATTCATCAAAGATCTTGTGTTGGTACACCTCAACAGAATGGTGTGGTTGAGAGAAAACATCAACACATTCTATGTGTTGCTAGGGCCATTTTCT TTCAATCATCCTTGCCTACTAATCTTTGGAACTTTGCTATTCAACATGCTGTCCATATCATTAATAGGCTTCCTAGTCCTTTGCTAAAGAATTCTAGTCC CTATCAACTATTGTATGGTTGCCTTCCCTCTCTTAATTCCCTAAGAGTATTTGGTTGCTTGGTGTATGCAAGTACTCTTAGTGCAGGGAGAGGCAAATTA GATTCCAGGGCTACGAAATGCATGTTCATTGGATACAAGGAAGGATCCAAAGGTTTCATCCTATATGACCTAGTTTCTCATGAACTTTTTATTTCTAGAG ATGTTGTTTTCTATGAAGAACACTTTCCTATGTCAGCTGCTTCCACTACTCCTTCTGATCCTCTTGTTCATCATACTCATAATTCCAACATTCTTGAGTC AAACATTTTTTTTTTGATTGAGTCAAACACACAATCTGTCCCTGAGTCTCATTCTCCAACCTCAAACACATTTTCCTTTATTGAGTCAAACACACAATCT GTTCCTGAGTCCAATTCTCCAACCTCAAATTCTTCTTCTTTTGAGTCAGACACTACTTCTTCACCTGCTATTGTTCCTAGGCAATCTACAAGACAGAGAA GACCACCTTCTCATCTTAATGACTACCATTGTAACCTTGCTCACACTGTCACAGAAACTGGCTCTTCCTCAAAAGTTGCTTACCCCTTATCTTCTGTTTT GGATTACTCCAAGTGCACTCCAGGGTATAAAAACTTTTGCCTAACCATCTCCAGTAGTTCTGATCCTACTACTTACAAAGAAGCAGTTGAATTCTCTCAT TGGAGACAAGCCATGGACACTGAATTAGAGGCCTTAACCCAAAACAAAACTTGGTCCTTGGTGCCTCTTCCACCAGACAAGGCTACCATTGGTTGTAAAT GGGTTTACAAGACCAAAGTTCATGCTGATGGAACTCTTGAAAGACATAAGGCCAGGTTGGTTGCAAAAGGATACACTCAATTAGAGGGAGTTGATTTTTT TGACACTTTTTCTCCTGTTGTAAAGATTACAACTGTGAGAACTGTCTTAGCCTTAGCAGCAATCAAGGGATGGTTCTTGGAACAACTTGATGTTAACAAT GCTTTTCTTCATGGAGACTTACATGAAGAAGTCTATATGGCTCCTCCTCCTGGTCTTGTTCTAAATGATCCTAGTCATGTATGCAAATTGCATAAATCCC TATATGGCCTGAAGCAAGCCAGCAGAGAGTGGCATACCACTCTTTCATCTTCCCTCATTTCTTTGGGATACTCTCACTCTGAGGCAGATCAAGCTTTGTT TACCAAGGCTGATTCTCAATCATTCACTGCAATCCTGGTTTATGTAGATGATATGGTTTTAGCAGGGAATGATACTCATGAGATCACTCAAGTCAAACAA TTTCTTGATCACACTTTTAAAATCAAAGATCTAGGATCTCTCAGATTTTTTTTGGGGCTTGAAATAGCTAGAACCAAAGATGGCATACATCTCAATCAGA GAAAATATGCCTTATCTCTTCTTGAGGAGACTGGAACTCTTGCTGCTAGGCCTGCAAAAGTTCCCTTTGATCCATCCCTCAAATTGCAGCTTGAGCAGGG CAACCCTTACCATGATGTGTTAGGCTATAGAAGGCTAGTTGGTAAATTGCTCTATCTTACCATTTCTAGACCTGATATAGCTTATGCAGTGCAGCAATTG AGCCTCTTCTTATGCAAACCTATGGATGCTCATTATAAGGCAGGCCTCAAGGTTTTGCACTATCTCAAAACTTCACCTGCACAAGGCTTGTTCTTCTCTG CCAATTCTGCTCTCAAGCTTTCTGGATTTGCTGATTCAGATTGGGCTTGTTGTTTGGATACCAGAAAGTCCATAACTGGGTTCTACATTTTCCTAGGCTC TTCCTTGATTGCTTGGAAGTCAAAAAAACAGAACACAGTTAGTAGGTCTTCCACTGAAGCTGAGTATAGGGCTCTTGGTAGCATTGCTTGTGAGCTGCAG TGGCTTAATTTTTTGTTCACTGATTTGCACATACCTTTGCTCAATCCTGCTTCAGTCTATTGTGACAATAGATCAACCATCTATTTGGCTCACAATCCTG TGTTCCATGAACGTTCCAAGCATATTGAAGTGGACTGCCATGTGATTCGTGAGAAAATTCGTCAAGGCCTCATTCATCTTCTACCAATCAGCTCCAAAGA TCAATTGGCTGATGCCTTCACAAAACCTCTTCCTTCTGCTTCTTTTCTCAGTTTCATTTCCAAGCTGGGTTTGTGCTCCATCCACGACCCAGCTTGAGGA GGGGTGTTGATTGTTGATTATTGCCTAATCTTCTTTGTATTTATCATAGCTTAGTGTTTTTGCTTCTTTTGAATCTAAGTTAGATATTTTTCTCATTCTT TCCTTTTTCAGAAAGTTTGTTAGAGGCAGTTATAACTACTTACTATAAATAGTAGTTATGAATAAGAGTATAATTGAAAATACAAAAAATCAATTCTCAC AGCTGGACTGTGTTACTTGAATTTTCAGTTGCTTTCTTATTATCTTTTCTCGGAAACCGAACAGGAGGATTGAAAATTTACAGTGATAGTGAAGTATTTT ATTATATTGTTGACATGAGTAACTTATGATGTGAATAATAGAAATTGTTTTGTACTAATTGGAATTTCCCTCTCTTTTGATTTCTTGTTTCCACGTTTGA AAGGTTTTGAAGCAGTGAAGTTC BLAST
Tissuepods
Gene nameLI_gene_172040; 
Additional informationdetails; 

Expression of Ll_transcript_454365

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_454365
BlastpRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 33.03% of identity
BlastxRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 39.92% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_017415202.1)
Pfamgag-polypeptide of LTR copia-type (PF14223.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;