Ll_transcript_454371

• Id Trinity: TRINITY_DN49767_c0_g2_i7
• Name Transcript: Ll_transcript_454371
• Sequence: CACATTACCTATGATGTGAGTTGCTTACTCTATCAGAGATCTATCTCTCCTGTGACAATCACCTTGCCTAATGGAGAAAAAGTTCACACTACTATTTGTG GCACTGTTATTCTCTCCAAATTTCTCACATTATATGATGTCTTGTATGTTCCTAAGTTTCATGTCAACCTTGTGTCAGTAGCTAAGTTGACTCAGTCACA CAATTGTCACTTAATGTTCACTCTTAATTCTTGTGTCATTATGCAGAACACTACCAAGAAGGTGATTGGTATAGCTAGCCTGCAACATGGTTTGTTTGTC ATCAATCCAATACAAAGAGGTTATTCATGTAATACAGTTTCTCAGTCTTCTAGTTCTGCTGGTTCTAGTGATTTTAATCTTTGGCATTTAAGGTTTGGTC ATGCTCCCTTATCTTCAATGAAAACTTTGTCTAGTCAGTTTACTTGTATTCCTTCATGTAATGCTGAACATGTTCCCTGTGATGTTTGCCATAGCTCTAG GCAAAGGAGATTACCTTTTTGTAACAGCTATACACAATCAAATAAAATGTTTCAATTGTTGCATGTTGATATATGGGGCCCTTACTCCATTACCTCCTTG TTAGGTCACAATTACTTCCTTACACTTGTTGATGATTTTACAAGGTTTACTTGGGTGATTATGATGAAAACCAAGAGTGAAACTAGGCAAAATCTCATTA ATTTTGTTGCCCTTATTGAAAATCAATTCAGTGTAAAACTTCAGACCATTAGGAGTGAAAACGGTCCTTGAGTTTTTGATGAATGATTTCTTCTCAAATA AAGGAATCATTCATCAAAGATCATGTGTTAACACACCTCAACAGAATGGTGTGGTAGAGAGAAAACATCAACACATTTTATGTGTTGCTAGAGCTATCTT CTTTCAGTGTTCCTTGCCCTCCACTCTTTGGAATTTTGCTATTCAGCATGCTGTTCATATTATTAATAGGCTTCCTAGCCCTCTGCTTAAGAACTCTAGT CCATACCAATTGGTGTATGGTTGTCTTCCTACTCTAGATTCTCTAAGAGTCTTTGGTTGCTTGGTTTATGCTAGTACTCTTAGTGCAGGCAGGGGCAAAT TTGATTCCAGGGCAAGAAAGTGTATTTTCCTTGGTTACAAGGAAGGATCAAAAGGGTTCATCATATATGACTTAAGTTCACATGAGATCTTTATCTCTAG GGATGTTGTTTTCTATGAAAAATTCTTTCCTATGATGTCTACTTCTTCTAGTCCTAATCTACCTCATGCTCATGGTTCCAATCCTCTTGAGTCAAACACA ATTCCTTCTTTTGAGTCAAACACACAGTCTGTCCCTGAGTCTATTCCTCCTATATCAAACACTTCTTCTTTTTTTGAGTCAAACACAGATTCTGTCCCTG AGTCCACTTCTCATACCTCAAACAATTCTTCTTTTTTTGAGTCAGACACTTCTCCTTCTCATGAGTCCAATTCAGACTCATACACACCTTCCCCTACATC CAATACTTCTTCTCCTACTGTTACCCTCAGACAGTCTACAAGACATAGACAACCTCCTTCTCATCTCAAAGACTATCATTGTGTTCTTGCTCACACTGTC ACAAAACCAGTTTCTTGTTCCAAGGTTGCTTATCCTCTATCGTCTGTTCTGGACTATTCCAAATGTTCTCCAGGGTACAAGAAATTTTGCTTAAGCATCT CTAGTGAATCAGATCCTACTACTTATAGAGAAGCAGTCAAGTCTTCTCATTGGAGACAAGCAATGGATGCTGAATTACAAGCCTTAGTTCTGAACCAGAC TTGGTCTTTGGTGCCTCTTCCAGCAGACAAGGCTACCATTGGTTGTAAATGGGTTTACAAAACCAAAGTCCATGCAGATGGCACTATTGAGAGACACAAG GCAAGATTGGTTGCTAAAGGGTATACTCAATTGGAGGGTGTTGATTTCTTTGATACTTTTTCTCCTGTTGTCAAAATCACCACTGTTAGAACTGTCTTGG CCTTAGCAGCTATTAAGGGCTGGTTCCTAGAGCAACTTGATGTGAACAATGCATTTCTGCATGGAGATTTGCATGAAGAGGTTTATATGGATCCACCTCC TGGTCTTGCTCTTGCTGATTCCACTCATGTTTGCAAATTGCATAAATCTCTCTATGGCTTGAAACAAGCCAGCAGAGAATGGCATCACACTCTCCCATGT GCTCTAATTTCCTTGGGTTATTCTCATTCAGAGGCTGACCAGGCCTTGTTCACCAAAGTTGCTTCTCAGTCCTTCACTGCCATCCTAGTATATGTTGATG ATATGGTCTTGGCAGGGACTGATAGTCATGAGATTACCCAAGTTAAAGAGTATCTTGATCACACTTTCAAGATTAAGGACCTAGGCTCTCTTAGATTCTT TCTAGGGCTTGAAATAGCAAGAACCACAGATGACATACATCTCAATCAGAGAAAGTATACCTTATCTCTTCTTGAAGAGTCTGGCACTCTAGCTGCTAAG CTTGCAAAGCTTCCTTTTGATCCTTCTCTTAAATTGCAGCAGGAGCAGGGCACACCCTTAGCTGATGTTTTAAGCTATAGAAGGCTGGTTGGTAAATTAC TCTACCTTACCATTTCCAGGCCTGATATAGCATATGCAGTGCAACAATTAAGTCTCTTTATGTGCAATCCTATGGATATCCACTACAAGGCAGGACTCAG AGTCCTTCACTACCTCAAAACCTCTCCTGCACAGGGACTGTTTTTCCCAACCAATTCTGAACTCAAACTTTCTGGTTTTGCTGATTCAGATTGGGCTTGT TGCTTGGATACCCGAAGGTCTATCACTGTTTTCTGCATCTTCCTTGGCTCTTCTTTAATTGCTTGGAAGTCCAAGAAACAGTCCACAGTGAGTAGATCTT CCACTGAAGCTGAGTATAGGGCATTAGGCAGCATTGCTTGTGAATTGCAGTGGCTCAAATTCTTGCTCACAGATCTGCACATTTCCTTACTCACTCCAGC TTCAGTGTACTGTGATAATAGATCAGCCATATACTTGGCTCATAATCCTGTTTTTCATGAACGTTCCAAGCACATTGAAGTGGATTGTCATGTCATTCGT GAGAAAATTCGCAGTTGCCTCATTCATCTTCTTCCAATCAGTTCCAAGGATCAATTGGCTGATGCTTTTACTAAGCCTCTTCCTCATGCTTCTTTTTCTG GTTTTCTTTCCAAGTTGGGTTTGGTTTCCCTACACCACCCAACTTGAGGGGGATGTTGATTATTTAAGCTTTTGTTCATTGCTTAGTTTCTTATTTATCC CTCTTAGTACTCTAATTAAGCTTTCTTTTCTGTTTTTAGCTTAAGTTAGTTTTCTTTCCTTTTATGGAAAGTTGTTAAGTGGCTGTTATTAACTACTTAC TATAAATAGTAGTTTTCTATATTTTCAATTTCATTGAAAACCAAATTCATTTCTCTATTTCCTCCTTCTCTTCTTCTTTGGATTCTAAGATGGCATCAGA GCAAAATTTGCTCTGATTCGTCCTTGAACCCTAGCTTTTCTTCTCTTCCTACTTGCGTTCCTCTTTCTCTCCTTCTTCTCGAATTCTCTCTTCTCTCTAC TGATTCTTCTGCTTTTGTGATTGATTTCTTCCTCAATTGCTTCTTATCAATGGCGAATCAGAGCTTCGAAGATTTTAACGCGAATCCTTCTAATCCTTAC TTTCTTCATTCGAATGAGAGTCCAACACTTGTCCTTGTTTCTCCTCTCCTGGACGGAAAGAACTACCACTCCTGGTCTAGAGCAATGAAATTAGCTCTTC AATCGAAGAACAAACTGCAGTTCATAGATCGATCCCTTTCTCAACCATCTGTGACTCATCCTTTGTATGCGCAATGGATAAGGTGTAACACGATGATCTT ATCGTGGTTACAACACTCTGTTGAAGAGAAGATAGTGAAATCCATACTTTGGATTGATGAGGCAGCAGATGCTTGGCAGGATCTTCATGATAGATACTCG CAGGGCGATGTTTTTCGTGTTGCTGAACTTCAAGAAGAGTTTTACAAAGCAAGCCAGGGCAATCAATCTGTTTCTGATTTCTTCACTCAATTGAAGGAAA TTTGGGAAGAAATTGATAATTACAGAGCCATAGGTCGTTGCAAGTGTGCTGTGCAGTGTGATTGTGGAATAATTGATTTGGTTAAGTTGCATAGGGAACA AGATTATGTAATTCGGTTCCTAAAGGGATTGAATGAACAATACTCACAAGTGAGATCTCAAATTATGCTAATAGAGCCTCTTCCTCCTATTAGCAAGGTT TTCTCAATGATTGTTCAGCAAGAAAGGCAGTTCAACATTCCTATACTCTCTAATCTGAAAGCTTTAGCTATTCAGTCTCAAGGAATTGCTCAACCTAGAA CCTATGGCATGACTAGAGGTAGAGGAAGCAATTTCTTCAGCGGTAGAGGAAGGAGT
• Tissue: pods
• Gene name: LI_gene_172040;
• Additional information: details;

Expression of Ll_transcript_454371

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0
• PS2: 0.6
• PS3: 0.1
• PW1: 0
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454371

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 34.02% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 39.22% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_017415202.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;