Ll_transcript_453844

Id TrinityTRINITY_DN49768_c0_g1_i10
Name TranscriptLl_transcript_453844
SequenceGGAAAGGACAATAAGAGCATGGTGTACACGTGCATATGATTTCAAGTCCTGAAATTTATTACACCCTTCTCTCTCTTTCTTTCTCTTTCTCTGCAAAAAG CACAACTCACGAAGTGAACAAAACAAACTCAGACAGTGAATGAATAGAAGAAGAAAACAGATTCATAATAAACAAAGTGAGTAACCCATAAAAGGAACTG AAACCTTACCCTTCATACTCTATCTTATGAAACCTGTTTTCCTATGTTGTTCTGTTCATTCAGACACTTCAGAAAGAGAGAGAAAGAGTAAATTATTATT CTTAGAGCATGAGTGAAAAGCATCTTCTTCTGCATTCTTTCTTACCTCTCATCAATCATTTTGTTTTTAATGATAAGGTTCTTCCAACCTTCTGCTTCAT TTGTCTGCCATTATTTTCTTCTCTTGTTTCCATCACATGAATTGAAAACCACAACATGACAATGGTTGAAGACTCTTTAGCACCACTCACATTTGACAGA ACTGCTGAACAGGCAATTGTATCTATAAAGAAAGGTGCACACTTACTTAAATGTGGTCGTCGAGGAAAGCCAAAGCTCTGCCCATTCAGACTTTCTCCGG ATGAGAGGAATTTGATATGGTACTCCGGGCAGCAGGAAAAGCATTTGCGACTGAGTGCAGTTACCGAAATTATTCAAAGGCAGGGAAATATAAGGTCCCA TGGACATGAGGAACCCGGAAAGGATGACCATTCAGTTTCACTAATCTATGCTAATGGTGGACGATCTCTTGATCTGATATGCAAGGACAAAGCGCAGGCT GCTTTGTGGTTTGTTGGCTTGAAAGCTGTGATTCCTACGTGCCTGCATCCTAGGCCGTTTAGCAGTTTAAGAAGCTGCAAAGGGGTGCAGAGTTGTGTTA GTAGTCCAGCTGGAATCTTCCGAAGAAAGAAAAATCTTGGCCTTCTGGATGAATCTTCTCAACTAACACAGGTACATAGTGTATGTGCAAGTCCTACTTT GTCACTTTCAGAAAGGTGCTTTTCGGATGGCTTGTCATATACATCTGATAACATTTATTCCAGAACTAAAGGAGTAATAGATAATTCAGTCCCAAGTTCG TCATATATAGATGCCGGCATTCTTAGTAAGGTTGAACCACTGCATCTTGACAGGGAGTACAAGAAAATCTTGTCCTATAGGTCTCTGATGCCTCCTGCCT CCCCGCGTATACGAAATAGCAATGTATTAAGGGATGTGATGGTATGGGGCGGAGGTATTGGAGGTCGTTTAGGGATTGTGAATGAAAGGTTTGTCAATCA ACATGGGATTTATTCTTTAGTGCCGAAGTTATTGGAATCGACTATGATGTTAGATGTACAAAATATAGCTCTAGGAAGTAATCATGCTGCCTTGGTTACA AAACAAGGTGAAGTTTTTTGCTGGGGTCAAGGGAAGTGGGGGAGGCTGGGGCAAAAAATTGATATAGACATTTGCTCTCCAAAACTAGTTGATTCTCTGA ACGGGATGCATGTAAAACATGTTGCCTGTGGCGAGTATCATACATGTGCTTTGACAGATTCGGGTGAAGTATATACATGGGGGAATGATGCTTGTAATGC AGATTTGGGTGATGAATGGAGAACTAGAAGTCAGTGGATACCGCATAAACTTTCTGGTCCTTTAGATGGTATTAGCATTTCGAGTATTGCTTGTGGGGAA TGGCATACTGCAATTGTCTCCATCTGTGGGCGGTTATTTACATATGGAGAAGGTACGTTCGGAGTTCTTGGGCACGGCAGTCTTAGGAGCTTTTCTCAGC CTAAAGAAGTCGATTCTCTAAGTGGTCTTAGAGTGAAGTCGGTGGGTTGCGGATCATGGCATACAGTAGCTATTGTTGAAGTCATTGCTGACCGTTTTAG GTATAATACTGCAAGTGGTAAGCTGTTTACATGGGGTGATGGAGATTATGGGAGGCTCGGTCACGCTGATAATGGAAGAAAGCTTATACCAACATGTGCT TCACAACTTGTTGACTATGATTTTGTTCAAGTGTCTTGTGGAAGAATGTTTACTGTTGCACTTACGACTATGGGCAAAGTTTTTGCAATGGGAAGTACGA AATACGGACAGCTGGGAAATCCACATGCTAGGGGCAAAGCAATTATGGTTGAAGGACTGCTTAAACAAGAGTTTGTTAAAGTGATTTCATGTGGTTCATA CCATGTTTCTGTTTTGACTTCTGCAGGGAGTGTCTATACATGGGGAAAGGGTCAAAATGGTCAACTCGGGCTAGGCGATACCGAAGATAGGAATACACCT TCTTTCGTTGAAACTCTAAGAGATAGGCATGTAGATACTATAACTTGTGGCCCAAGCTTCACAGCCGCAATCTGTTTACACAAACCTATTTCTATCAGTG ACCAGTCAGCTTGTAGTGGTTGTAGGTTGCCGTTCGGGTTCACACGGAAGAAGCATAACTGTTATAACTGTGGACTTCTGTTTTGCCATGCTTGTAGTAG TAAAAAAGCTAAAAATGCATCTCTAGCCCCAAGTAAGAGCAAGGCTTTCCGGGTGTGTGATCAGTGCTTTGATAAACAACAAGGAAGTACCTATTCTGGA ATGGCATCAAAGTCTAGAAGTCACAACAATCAGCAGGTGCTGAAGCATCAAAACAAATTTCCCTATCTCACTGAAGATAGGGGAGAAACAACAGTGACAC AGGGTCCATTATTATCTCTTAGTCAATCATGTTACAGGAAAAGCATGCCGAGTGGACGGAAGGCCTGGGAAAACCAACAAGGAAGCCAGCAGCACTTGGA AGATAGTTCTTCGACATTTAATGGAGTGTCGCGATGGGGGCAGGTTCCATGTCCAGACTTCTTTAACGTGAATTGTACAAAAAAATCAGCTATGCATGTT TCTTCATGGAAACATAAATCAGCTACTGTTTCACCATTGAATACAGAATCTGCAGTATGCAACCTCCCTGTTGCTGAGACAGATACAACAAAGTCAGATA AGATGCTCATAGAAGAAGTTCAGAGGCTGAGAACTGAGGTTTTACTTTTCTTTTAAGCCATATGTTGTTCTAAGGTTTCATTAGAAAAGGACAACTGTAT TTAGTGTTTTTCCAAGTTTCCTTCGGGATTAACATTAGTCGTATTTAGCCCGCTCGGAGACTTGAAGAGAAGTGTGAGCTGAAAAACCAAAAAATACTAG AGTGCCAACAAAAAGTTGAGGAGAGCTGGCTTGTGGCTAAGGAGGAAGCTGCCAAGAGCAAAGCAGCAAAAGAGGTCATAAAAGCTTTGGCATTAAGGCT TCATACATTGTCAGAAAAAGACAATGGTGGACAAGAAGAAAAGGTTATACATGAATGTCCACCTACTTTGGCACACATACAAACAGATATCAAGAGTCCA AAAGTTGGCAACATTGACAGTCTATCTAATTCCCCAATAGTATTTTCTGATACAGTAAAATCCAAATTTGGGAGAGGTATGCTCCTAAAAAATGATAAAT TATTGGAGAACTCTAACTTCAATAGTGCAGAACCACAAGAAAGCAGCGCCGACGGCTCGAAGGCTGAATGGGTAGAACAGTATGAGCCCGGTGTTTACAT CACATTAACAACCTTATCAAGTCAGAAAAAAGGCCTTAAGCGAGTGAGGTTTAGCCGGAAACGATTCTCCGAGAAGGAAGCTGAAAGGTGGTGGGAAGAG AATCAAGCTATAGTATACCATAAGTATGATATTGAAGGATATACAAACACTAAACAAATTCAGTTGAAAGGCTGATTTTTTTTATTTGCCATTCATTTTT AGTAGTTTTCTCTAAAGTTATTGGTTGGTGGTGAGAAGTTTGCCTCAGGCTCTAGATTCTCTTGTATCTAAGCATCCTTTGCTCAATAGTGTGTTGGGGC ATTCCATCTTGTGTACATACACCAATAACAGAGTGTCTCTTGGTTTTATTTTAAGGGTTATTCTACTAAAACTGGTCTATTTTATTTCTACTATATAAGA AAAATGATGTATCCTCTTATAAAACCATCCTACAAAGTTTCC BLAST
Tissuepods
Gene nameLI_gene_172043; 
Additional informationdetails; 

Expression of Ll_transcript_453844

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_453844
BlastpPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 54.13% of identity
BlastxPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 53.78% of identity
Eggnogregulator of chromosome condensation(COG5184)
KeggLink to kegg annotations (AT1G76950)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019439521.1)
PfamRegulator of chromosome condensation (RCC1) repeat (PF00415.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;