Ll_transcript_453839

Id TrinityTRINITY_DN49768_c0_g1_i5
Name TranscriptLl_transcript_453839
SequenceCTCGACGAGTTCTCTTCCTTGATGTACTATCTGCATTAATCCGAAGCTATCATGAGAAATGAAAAGAATAAAATAATGTTTAGTCTAATAAATGGCTTCG CATTTTCAGATAAGGTCCCATGGGCACGAGGAGCCTGGAAAGGATAGCCATTCATTTTCGCTAATCTATGCTAATGGTGAACGCTCTCTCGATCTGATAT GCAAGGATAAAGCACAGGTTGCTTTGTGGCTTGTTGGCTTGAAAGCAGTGATTTCTCGGTGCCAGCATCCTAAACCTTTTAGTAGTTTAAGAAGCTGCAA AGGGGTTCAGAGTTGTGTTAGTAGTCCAGCTGGAATCTTCCGAAGAAAGAAAAATCTTGGCCTTCTGGATGAATCTTCTCCATTTACACAGGTACATAGC GTATGCGCAAGTCCTACTTTGTCACTTTCAGAAAGGTGCTTTTCTGATGGATTTTCGTATGCATCTGATAACCTTTATTCCAGAACTCATGCCGTAAAAG ATCATTCAGTCCCGAGTTCACCTTACATTGATCCAGATATTCCTTGTAAGGTTGAATCACCATGTCTTCACAAGGAGTACAAGAATTTGTCTTATAGGCC TCTGATGCCTCCACCCTCCCCCCGGATACGAAATAACAATGTATTAAAGGATGTGATGGTATGGGGAGGAGGGATTGGAGGTCCATTAGGGATTGGGAAT GAAAAGTTTGTCAACCAACATGGGATTTATTCTTTAGTTCCGAAGTTACTAGAATCCACTATGATGTTAGATGTACAAAATATAGCTCTAGGAGGAAAAC ATGCTGTCTTGGTTACAAAACAAGGGGAAGTGTTCTGCTGGGGTCAAGGGAAGTGGGGAAGGTTGGGGCAAAAAAATGATATTGACATTAGCTCTCCGAA AATAGTTGATTCTCTTAACGGTATCCATATTAAAAATGTTGCATGTGGTGAATACCATACGTGTGCTTTGACTGATTCCGGTGAAGTATATACATGGGGA AATGATGCTTGTAGTGTAGATTTGGCTGATGAATGGAGAAATAGAAGTCAGTGGATACCACAAAAACTTTCCGGTCCTTTATATGACATTAGTATTTCAA GTGTTGCTTGTGGGGAATGGCATACTGCAATTGTCTCCATCTGTGGGCGGTTATTTACATATGGAGAAGGTACATTTGGCGTTCTTGGCCACGGCAATTG TAGGAGTTTTTCTCAGCCAAAAGAAGTCGAATCTTTGAGTGGTCTCAGAGTGAGGTCTGTTGCTTGTGGATCGTGGCATACGGCCGCTATTGTAGAAGTC ATTGCTGACCATTTTAGGTATAGTACTGCGAGTGGTAAGCTTTTTACATGGGGTGATGGAGATGAAGGGAGGCTCGGCCATGCTGATAATAGAAGCAAAC TTATACCAACATGTGTTTCACAGCTTGTTGACTATGATTTTGTTCAAGTGTCTTGTGGAAGAATGTTGACCGTTGCGCTTACTACTATGGGCAAAGTTTT TGCAATGGGAAGTGCAAAATTTGGACAATTGGGAAATCCACGTGCTAGGGACAAAGCAGTTATGGTTGAAGGACTTCTGAAAAAAGAGTTTGTTAAAGTG ATATCATGTGGTTCATATCATGTTGCTGTTCTGACTTCTGCCGGGAGTGTCTATACATGGGGCAAGGGTGAAAATGGTCAACTCGGGCTAGGAAATACTG AAGACAGATTCACCCCTTCTTTTGTTGAAACACTAAGAGATAGGCAGGTGGATGCAATAACTTGTGGCCCAAGCTTCACAGCCGCAATCTGTTTACACAA ACCTATTTCTATCAGTGACCAATCAGCATGTAGTAGTTGTAGGTTGCCATTTGGGTTCACAAGGAAGAAGCATAACTGTTATAACTGTGGTTTTCTATTC TGCCATGCATGTAGTAGTAAAAAAGCTATCAATGCATCACTAGCCCCAAGTAAGTGCAAGGCTTTTCGGGTTTGTGATCAGTGCTTCGATAAACCTCAAG GAAGTACATATTCTGGAATGGCGTCAAAGTCCGGAAGTTACAACACTCAACAATTACTGAAGCATCAAAACAAAATTTCCGATCTGACTGATGATAGGGG AGAAACAACAGTAGCACAGAGTGCCATGTCTCTTGGTCAATCATGTTACAGGAAAAGCATGCCGAGTGGACGGAAGGACTGGAAAAACCAACAAGAAAGC CAGCAGCATTTAGAAGATAATTCTTCTGTGTTGAGTGGAGTATCGCGATGGGGGCAAGTTCCATGCCCTGATTCGTTTAACATCAATTGTACAGAACGAT CAGTTATGCGTGTTTCTTCATCCAAAAATAAATTAGCCACTGTTTCACCAATAGAAATAGAATCTGCAGCATGCAACTTCACTACTGCTGAGACAGATAC AACAAAGTCAGATAAGATGCTCATAGAAGAAGTTCAAAGACTGGGAGCTGAGGCTAGAAGACTTGAAGAGCAGATTGAGCTCAAAAACCAAAAATTACAA GAGTGTCAACAAAAACTCGAGGAGAGTTGGCTTGTGGCTAAGGAGGAAGCTGCTAAGAGCAAGGCAGCAAAAGAGGTCATAAAAGCTTTGGCATTAAGGC TTCATACATTATCAGGAAAAGATAATGGTGGACAAGAAGAAAAGGTTATACATGAATGTCTGCCTAATTTGGCTCACATACAAACAGATATCAAGAGTCC AAAAGTTAGCAACATGGACAGTCTATCAAATTCACCTATAGTATTTTCCGATACACTAAAATCCAAAATTGGGAGAAGTATGCTCCTTAAAAATGATAAA TTATCGGAGAACTTGAACTTCAATAGAGCAGAACCACAAGAAGACAGCAACAGCTTGAAGGCTGAATGGGTAGAACAGTATGAGCCCGGTGTTTACATCA CATTAACAACCTTATCATGTGGAAAAAAGGGCCTTAAGCGAGTGAGATTTAGCCGGAAACGATTCTCGGAGAAGGAAGCTGAAAGATGGTGGGAAGGGAA TCAAGCCACAGTCTACCATAAGTATGATATTGAAGGATATACAGACACAAGACAAAGTTGAAAGGCTAATTATTTACTTGTCACTCATTTTTAGTAGTTT TGTTTTCTCCAGTTATTGGTATAGGTGGTGATTTTGGCTTCATGTTTAAGATTAGAAGTTTAATGCAAGAAATAGTATGCATTCATGTATCTAAGTGTTC CTTTGCTCATGAATATATTGGGGCATTCCATCTTGTGTATAGTCACTAATAACAGAGTATATCTTAATTTTATTTTAAAGGTTGTTCTAATTTAAACATG TCAAATATATTTCCATAATGTAAAGTTTGTTGTAATTCAACCTTCTACTTCAATTTTCCTAGTACTATTAAGGAATGACATGACAAAG BLAST
Tissuepods
Gene nameLI_gene_172043; 
Additional informationdetails; 

Expression of Ll_transcript_453839

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_453839
BlastpPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 40% of identity
BlastxPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 55.79% of identity
Eggnogregulator of chromosome condensation(COG5184)
KeggLink to kegg annotations (AT1G76950)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419884.1)
PfamRegulator of chromosome condensation (RCC1) repeat (PF00415.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;