Ll_transcript_453841

Id TrinityTRINITY_DN49768_c0_g1_i7
Name TranscriptLl_transcript_453841
SequenceATAATAGTGTTCAAATGTTCTCTCACCATTTCTTCTCACATGTTTCCAAAATTTCAATCTGTTTTGGTTCTGAAATGAAATCCTTTCAAAAAGAAATGAT TTTTAGTTGTCTGGCCCTGTGATTATTATATATTTTTCTCTACAACATGCATAAAACTATAATGGGTGTCCAAATTTTGGAACTTGGAAGGGAATTACTG CTGGTTTCTGTTCAAAATTCAGAATACAATGATTTTTATTACTGTTTGTATTTTGAGATTTTTCAATACATTGCTCCTCATAATGCATTTCATTCAGTGC CAGTGATATTTGATTGTTGCACTCTCTTTGTCAAAGGAGGGAGAAAAATGGGTTCTTTTCTCTTCCAAGTTATTTTTTCTCAAAAAACCAGTAAGCATAA GAAGGAGTAGGTGTCAGTTTGGTTCTTACATAACAATCATCCGATTTTAGTTTAATACTAATTAGGATTAATTGCAAATGCATCATATTTTTGTTTGGAG TAATTTTCTTATACCTTAGGAATTTCGAGCCGTGGCACAACAGTAGGAGATATTGCCATGTGACATTGAAGCATATGTTCGAATCGTGGAATCAGCACTC TTGCAAATGCGAGTTAATATTCCTTTCTCCAAAACTGAAGAAGTGGTTTGTGTTATTTTCAGGCAATTGTATCTATAAAGAAAGGTGCACACTTACTTAA ATGTGGTCGTCGAGGAAAGCCAAAGCTCTGCCCATTCAGACTTTCTCCGGATGAGAGGAATTTGATATGGTACTCCGGGCAGCAGGAAAAGCATTTGCGA CTGAGTGCAGTTACCGAAATTATTCAAAGGCAGGGAAATATAAGGTCCCATGGACATGAGGAACCCGGAAAGGATGACCATTCAGTTTCACTAATCTATG CTAATGGTGGACGATCTCTTGATCTGATATGCAAGGACAAAGCGCAGGCTGCTTTGTGGTTTGTTGGCTTGAAAGCTGTGATTCCTACGTGCCTGCATCC TAGGCCGTTTAGCAGTTTAAGAAGCTGCAAAGGGGTGCAGAGTTGTGTTAGTAGTCCAGCTGGAATCTTCCGAAGAAAGAAAAATCTTGGCCTTCTGGAT GAATCTTCTCAACTAACACAGGTACATAGTGTATGTGCAAGTCCTACTTTGTCACTTTCAGAAAGGTGCTTTTCGGATGGCTTGTCATATACATCTGATA ACATTTATTCCAGAACTAAAGGAGTAATAGATAATTCAGTCCCAAGTTCGTCATATATAGATGCCGGCATTCTTAGTAAGGTTGAACCACTGCATCTTGA CAGGGAGTACAAGAAAATCTTGTCCTATAGGTCTCTGATGCCTCCTGCCTCCCCGCGTATACGAAATAGCAATGTATTAAGGGATGTGATGGTATGGGGC GGAGGTATTGGAGGTCGTTTAGGGATTGTGAATGAAAGGTTTGTCAATCAACATGGGATTTATTCTTTAGTGCCGAAGTTATTGGAATCGACTATGATGT TAGATGTACAAAATATAGCTCTAGGAAGTAATCATGCTGCCTTGGTTACAAAACAAGGTGAAGTTTTTTGCTGGGGTCAAGGGAAGTGGGGGAGGCTGGG GCAAAAAATTGATATAGACATTTGCTCTCCAAAACTAGTTGATTCTCTGAACGGGATGCATGTAAAACATGTTGCCTGTGGCGAGTATCATACATGTGCT TTGACAGATTCGGGTGAAGTATATACATGGGGGAATGATGCTTGTAATGCAGATTTGGGTGATGAATGGAGAACTAGAAGTCAGTGGATACCGCATAAAC TTTCTGGTCCTTTAGATGGTATTAGCATTTCGAGTATTGCTTGTGGGGAATGGCATACTGCAATTGTCTCCATCTGTGGGCGGTTATTTACATATGGAGA AGGTACGTTCGGAGTTCTTGGGCACGGCAGTCTTAGGAGCTTTTCTCAGCCTAAAGAAGTCGATTCTCTAAGTGGTCTTAGAGTGAAGTCGGTGGGTTGC GGATCATGGCATACAGTAGCTATTGTTGAAGTCATTGCTGACCGTTTTAGGTATAATACTGCAAGTGGTAAGCTGTTTACATGGGGTGATGGAGATTATG GGAGGCTCGGTCACGCTGATAATGGAAGAAAGCTTATACCAACATGTGCTTCACAACTTGTTGACTATGATTTTGTTCAAGTGTCTTGTGGAAGAATGTT TACTGTTGCACTTACGACTATGGGCAAAGTTTTTGCAATGGGAAGTACGAAATACGGACAGCTGGGAAATCCACATGCTAGGGGCAAAGCAATTATGGTT GAAGGACTGCTTAAACAAGAGTTTGTTAAAGTGATTTCATGTGGTTCATACCATGTTTCTGTTTTGACTTCTGCAGGGAGTGTCTATACATGGGGAAAGG GTCAAAATGGTCAACTCGGGCTAGGCGATACCGAAGATAGGAATACACCTTCTTTCGTTGAAACTCTAAGAGATAGGCATGTAGATACTATAACTTGTGG CCCAAGCTTCACAGCCGCAATCTGTTTACACAAACCTATTTCTATCAGTGACCAGTCAGCTTGTAGTGGTTGTAGGTTGCCGTTCGGGTTCACACGGAAG AAGCATAACTGTTATAACTGTGGACTTCTGTTTTGCCATGCTTGTAGTAGTAAAAAAGCTAAAAATGCATCTCTAGCCCCAAGTAAGAGCAAGGCTTTCC GGGTGTGTGATCAGTGCTTTGATAAACAACAAGGAAGTACCTATTCTGGAATGGCATCAAAGTCTAGAAGTCACAACAATCAGCAGGTGCTGAAGCATCA AAACAAATTTCCCTATCTCACTGAAGATAGGGGAGAAACAACAGTGACACAGGGTCCATTATTATCTCTTAGTCAATCATGTTACAGGAAAAGCATGCCG AGTGGACGGAAGGCCTGGGAAAACCAACAAGGAAGCCAGCAGCACTTGGAAGATAGTTCTTCGACATTTAATGGAGTGTCGCGATGGGGGCAGGTTCCAT GTCCAGACTTCTTTAACGTGAATTGTACAAAAAAATCAGCTATGCATGTTTCTTCATGGAAACATAAATCAGCTACTGTTTCACCATTGAATACAGAATC TGCAGTATGCAACCTCCCTGTTGCTGAGACAGATACAACAAAGTCAGATAAGATGCTCATAGAAGAAGTTCAGAGGCTGAGAACTGAGGCTCGGAGACTT GAAGAGAAGTGTGAGCTGAAAAACCAAAAAATACTAGAGTGCCAACAAAAAGTTGAGGAGAGCTGGCTTGTGGCTAAGGAGGAAGCTGCCAAGAGCAAAG CAGCAAAAGAGGTCATAAAAGCTTTGGCATTAAGGCTTCATACATTGTCAGAAAAAGACAATGGTGGACAAGAAGAAAAGGTTATACATGAATGTCCACC TACTTTGGCACACATACAAACAGATATCAAGAGTCCAAAAGTTGGCAACATTGACAGTCTATCTAATTCCCCAATAGTATTTTCTGATACAGTAAAATCC AAATTTGGGAGAGGTATGCTCCTAAAAAATGATAAATTATTGGAGAACTCTAACTTCAATAGTGCAGAACCACAAGAAAGCAGCGCCGACGGCTCGAAGG CTGAATGGGTAGAACAGTATGAGCCCGGTGTTTACATCACATTAACAACCTTATCAAGTCAGAAAAAAGGCCTTAAGCGAGTGAGGTTTAGCCGGAAACG ATTCTCCGAGAAGGAAGCTGAAAGGTGGTGGGAAGAGAATCAAGCTATAGTATACCATAAGTATGATATTGAAGGATATACAAACACTAAACAAATTCAG TTGAAAGGCTGATTTTTTTTATTTGCCATTCATTTTTAGTAGTTTTCTCTAAAGTTATTGGTTGGTGGTGAGAAGTTTGCCTCAGGCTCTAGATTCTCTT GTATCTAAGCATCCTTTGCTCAATAGTGTGTTGGGGCATTCCATCTTGTGTACATACACCAATAACAGAGTGTCTCTTGGTTTTATTTTAAGGGTTATTC TACTAAAACTGGTCTATTTTATTTCTACTATATAAGAAAAATGATGTATCCTCTTATAAAACCATCCTACAAAGTTTCC BLAST
Tissuepods
Gene nameLI_gene_172043; 
Additional informationdetails; 

Expression of Ll_transcript_453841

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_453841
BlastpPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 41.53% of identity
BlastxPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 41.39% of identity
Eggnogregulator of chromosome condensation(COG5184)
KeggLink to kegg annotations (AT1G76950)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019439523.1)
PfamRegulator of chromosome condensation (RCC1) repeat (PF00415.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;