Ll_transcript_453843

Id TrinityTRINITY_DN49768_c0_g1_i9
Name TranscriptLl_transcript_453843
SequenceGCAGGGAAATGTATGTAACAAACATTGATGAGATCATGCTTGATGTACTATCTACATGAATATGAAGATAAGGTCCCATGGACATGAGGAACCCGGAAAG GATGACCATTCAGTTTCACTAATCTATGCTAATGGTGGACGATCTCTTGATCTGATATGCAAGGACAAAGCGCAGGCTGCTTTGTGGTTTGTTGGCTTGA AAGCTGTGATTCCTACGTGCCTGCATCCTAGGCCGTTTAGCAGTTTAAGAAGCTGCAAAGGGGTGCAGAGTTGTGTTAGTAGTCCAGCTGGAATCTTCCG AAGAAAGAAAAATCTTGGCCTTCTGGATGAATCTTCTCAACTAACACAGGTACATAGTGTATGTGCAAGTCCTACTTTGTCACTTTCAGAAAGGTGCTTT TCGGATGGCTTGTCATATACATCTGATAACATTTATTCCAGAACTAAAGGAGTAATAGATAATTCAGTCCCAAGTTCGTCATATATAGATGCCGGCATTC TTAGTAAGGTTGAACCACTGCATCTTGACAGGGAGTACAAGAAAATCTTGTCCTATAGGTCTCTGATGCCTCCTGCCTCCCCGCGTATACGAAATAGCAA TGTATTAAGGGATGTGATGGTATGGGGCGGAGGTATTGGAGGTCGTTTAGGGATTGTGAATGAAAGGTTTGTCAATCAACATGGGATTTATTCTTTAGTG CCGAAGTTATTGGAATCGACTATGATGTTAGATGTACAAAATATAGCTCTAGGAAGTAATCATGCTGCCTTGGTTACAAAACAAGGTGAAGTTTTTTGCT GGGGTCAAGGGAAGTGGGGGAGGCTGGGGCAAAAAATTGATATAGACATTTGCTCTCCAAAACTAGTTGATTCTCTGAACGGGATGCATGTAAAACATGT TGCCTGTGGCGAGTATCATACATGTGCTTTGACAGATTCGGGTGAAGTATATACATGGGGGAATGATGCTTGTAATGCAGATTTGGGTGATGAATGGAGA ACTAGAAGTCAGTGGATACCGCATAAACTTTCTGGTCCTTTAGATGGTATTAGCATTTCGAGTATTGCTTGTGGGGAATGGCATACTGCAATTGTCTCCA TCTGTGGGCGGTTATTTACATATGGAGAAGGTACGTTCGGAGTTCTTGGGCACGGCAGTCTTAGGAGCTTTTCTCAGCCTAAAGAAGTCGATTCTCTAAG TGGTCTTAGAGTGAAGTCGGTGGGTTGCGGATCATGGCATACAGTAGCTATTGTTGAAGTCATTGCTGACCGTTTTAGGTATAATACTGCAAGTGGTAAG CTGTTTACATGGGGTGATGGAGATTATGGGAGGCTCGGTCACGCTGATAATGGAAGAAAGCTTATACCAACATGTGCTTCACAACTTGTTGACTATGATT TTGTTCAAGTGTCTTGTGGAAGAATGTTTACTGTTGCACTTACGACTATGGGCAAAGTTTTTGCAATGGGAAGTACGAAATACGGACAGCTGGGAAATCC ACATGCTAGGGGCAAAGCAATTATGGTTGAAGGACTGCTTAAACAAGAGTTTGTTAAAGTGATTTCATGTGGTTCATACCATGTTTCTGTTTTGACTTCT GCAGGGAGTGTCTATACATGGGGAAAGGGTCAAAATGGTCAACTCGGGCTAGGCGATACCGAAGATAGGAATACACCTTCTTTCGTTGAAACTCTAAGAG ATAGGCATGTAGATACTATAACTTGTGGCCCAAGCTTCACAGCCGCAATCTGTTTACACAAACCTATTTCTATCAGTGACCAGTCAGCTTGTAGTGGTTG TAGGTTGCCGTTCGGGTTCACACGGAAGAAGCATAACTGTTATAACTGTGGACTTCTGTTTTGCCATGCTTGTAGTAGTAAAAAAGCTAAAAATGCATCT CTAGCCCCAAGTAAGAGCAAGGCTTTCCGGGTGTGTGATCAGTGCTTTGATAAACAACAAGGAAGTACCTATTCTGGAATGGCATCAAAGTCTAGAAGTC ACAACAATCAGCAGGTGCTGAAGCATCAAAACAAATTTCCCTATCTCACTGAAGATAGGGGAGAAACAACAGTGACACAGGGTCCATTATTATCTCTTAG TCAATCATGTTACAGGAAAAGCATGCCGAGTGGACGGAAGGCCTGGGAAAACCAACAAGGAAGCCAGCAGCACTTGGAAGATAGTTCTTCGACATTTAAT GGAGTGTCGCGATGGGGGCAGGTTCCATGTCCAGACTTCTTTAACGTGAATTGTACAAAAAAATCAGCTATGCATGTTTCTTCATGGAAACATAAATCAG CTACTGTTTCACCATTGAATACAGAATCTGCAGTATGCAACCTCCCTGTTGCTGAGACAGATACAACAAAGTCAGATAAGATGCTCATAGAAGAAGTTCA GAGGCTGAGAACTGAGGCTCGGAGACTTGAAGAGAAGTGTGAGCTGAAAAACCAAAAAATACTAGAGTGCCAACAAAAAGTTGAGGAGAGCTGGCTTGTG GCTAAGGAGGAAGCTGCCAAGAGCAAAGCAGCAAAAGAGGTCATAAAAGCTTTGGCATTAAGGCTTCATACATTGTCAGAAAAAGACAATGGTGGACAAG AAGAAAAGGTTATACATGAATGTCCACCTACTTTGGCACACATACAAACAGATATCAAGAGTCCAAAAGTTGGCAACATTGACAGTCTATCTAATTCCCC AATAGTATTTTCTGATACAGTAAAATCCAAATTTGGGAGAGGTATGCTCCTAAAAAATGATAAATTATTGGAGAACTCTAACTTCAATAGTGCAGAACCA CAAGAAAGCAGCGCCGACGGCTCGAAGGCTGAATGGGTAGAACAGTATGAGCCCGGTGTTTACATCACATTAACAACCTTATCAAGTCAGAAAAAAGGCC TTAAGCGAGTGAGGTTTAGCCGGAAACGATTCTCCGAGAAGGAAGCTGAAAGGTGGTGGGAAGAGAATCAAGCTATAGTATACCATAAGTATGATATTGA AGGATATACAAACACTAAACAAATTCAGTTGAAAGGCTGATTTTTTTTATTTGCCATTCATTTTTAGTAGTTTTCTCTAAAGTTATTGGTTGGTGGTGAG AAGTTTGCCTCAGGCTCTAGATTCTCTTGTATCTAAGCATCCTTTGCTCAATAGTGTGTTGGGGCATTCCATCTTGTGTACATACACCAATAACAGAGTG TCTCTTGGTTTTATTTTAAGGGTTATTCTACTAAAACTGGTCTATTTTATTTCTACTATATAAGAAAAATGATGTATCCTCTTATAAAACCATCCTACAA AGTTTCC BLAST
Tissuepods
Gene nameLI_gene_172043; 
Additional informationdetails; 

Expression of Ll_transcript_453843

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_453843
BlastpPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 41.42% of identity
BlastxPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 41.27% of identity
Eggnogregulator of chromosome condensation(COG5184)
KeggLink to kegg annotations (AT1G76950)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019439523.1)
PfamRegulator of chromosome condensation (RCC1) repeat (PF00415.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;