| Id Trinity | TRINITY_DN49769_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_453600 |
| Sequence | TAATTAACCTCTGGAAAATGCTGTTTATTGGTTCCTTGGAAATCATTGACACTTTATAAAGCTACTGGTAACCTTTACGCCCATTTATTAAAATTGTATG TGCCAGAATTTGACTGTCAACCCAGGGCAGGACTTGTGAGGAATGTAGAACTTCATTTATGTACATTGTCCATTTTTATGTTCATTTCATACTTGCTTAT GCTTTGATACCTTATCACTTGTCATCCTTACTTCTTTATCTCTTATTTTCAGAAAAGGCTCAATATAACAAAAACAGTTCGTAAGTTTTCCATTGATTCA AATTTTAGACGCGTTGGTTTCGAGTTTCATCCAGGAACAGTTGCAAATGCTGTTAAGCATGATGATGAAGTAGATGGAGATTCTGTTGAAGGTTCTTTAT CTCTCACGGAACATAACTTTAATAAATATATTCATCAGTTTCCAATTACAGTTGTAAACTTTTATGCACCTTGGTGTTCCTGGTGTCAACGTTTGAAACC TTCATGGGAGAAGGCAGCTAATATAATAAAAGAGAGATATGACCCAGAAATAGATGGGCGTATACTTGTGGCGAAGGTAGATTGCACTCAAGAAATTGAT TTATGCAGGAGGCATCACATACAAGGGTTTCCTTCTATTCGCATTTTCCGCAAAGGAAGTGATATCAGAACTGAGCATGGGCATGAACATGAGTCCTATT ATGGAGATCGTGATACAGAAAGCTTAGTCAAGATGTTGGAGAATTTGGTGATATCTCTCCATACAGAACCTCATAAGCCAGCTTTGGAGGATAAAAGCAC TGCAGCAAATAAAACAAAGAGACAAGCACCGACAACAGGTGGATGTAGACTTGAGGGATATGTGCGTGTGAAAAAGGTTCCTGGAGAACTGATCATCTCA GCTAGGTCGGATGCTCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCATAAACCATCTGTTTTTCGGAAGGAGCATAACACCTAAGACTATGC ATGATGTGAACATTTTGTTGCCTTACTTAGGTAGCAGCCATGACAGACTGGAAGGCCGGTCATTCATCAATACCCGTGATTTAGAAGGAAATATTACTGT AAGTTTAATGTTTATATAAAATTAATTTAGTGCCAACATTACTATTTGACTTTGTATGGTTGGTATGACCGTATGAGAGTGTTTGATTGCATATTGTAGC TGGACAGGGTATTTTGATGAATTAATCTCCATTGCCTAGAGTAAGATGCTACAGATAGCATGGATGGCCACAGCCTCGCAAAGTTTTTCGCATTCTCATT TTCCTTCTTCTTTCATTTTATAGTGCCTTATAGTCCAAGAGATATTAGTTTACAATAGATACCATATCATTCCAATGCCATTATTGGATAGGTTGGGGTC TTTTTCCCCATCTCTTTTAGTTAGTCAATCAGCCAAAAAATTTACTTTCAGTTTACAGGAAAACACTTACAAAATCATTTGGGTACAGCTTGGAATGCTT TTAGATTCTTACACTTACCAGGACAGAAACCATTGATTCTCTATGCTCATTCAAGCTATAGTCACTAACAGACCTCTCTATGTTTTCACACACTTCTCAA CTTCCAGTTTCACTTTGTGAAGCACAAACATGGGAGATTGATATAGTGCCACAGCTCCAATATTTTTAAAGTGGCCTTGTTAAAATTTAGATACTTTGAC ATGGACATGGTTCTTTTTTCCTTTTCTTGTAAGCACATATGCTTCATATCACTCTTTAAGATGCACCAAGTGTTTGCACCAAAATTTGTTTGGATTATCT TGTATATGCTCCCCCTAATATCTGTTTGAAACACCCAGCAAAGAAGTAACAAAACAAAGGAATTCATTTACTTCTTCACTCATTTGTGACACCTTTTCGT CTCCACTGAGATAAAAAATACTTTTCATTGGTACAGTTTGTTATCATTAGATGACGGTGATCATGGTTAGTTCTTTCTGTATGGATGCTGATAGCTACTA AGTCATGATCATCTCTGACATTTGGAGATTTATTGTATTTTGATAGAAGATATATGGAATATTTATTCTAACCAAAATGTTATACATTCACCTGATATCT GTCTGCAGATAGAGCATTATATCCAGGTAGTTAAAACAGAGGTTAAAACTAAAACAGGTGCTAGATTAGTTGAGGAATACGAGTACACAGCGCACAGCAG TCTGGCACACAGTGTTGCCATTCCGGTAGCAAAATTTCATCTTGAGCTCTCCCCCATGCAGATCTCAATAACAGAAAACCAGAAGTCTTTTTCACATTTT ATCACAAATGTCTGCGCTATTATTGGGGGTGTTTTCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_172045; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_453600
| Blastp | Protein disulfide-isomerase 5-4 from Arabidopsis with 62.6% of identity |
|---|---|
| Blastx | Protein disulfide-isomerase 5-4 from Arabidopsis with 66.43% of identity |
| Eggnog | Endoplasmic reticulumgolgi intermediate compartment protein(ENOG410XP7X) |
| Kegg | Link to kegg annotations (AT4G27080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453659.1) |
| Pfam | Endoplasmic reticulum vesicle transporter (PF07970.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |