| Id Trinity | TRINITY_DN49778_c4_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_454054 |
| Sequence | CAAAAAGATTTATAAAAGGAAGAAGGTAAGGATTGGCCCCTAACCATCTTTGGAACCAACAAGAGGCTCGGGCTTGAGTGGTAGAACCGTCAAAACCTAT GGCTTCACCGGCGGATTCTCCGAAGACCGATTCTCACTCCGAGTTCACTTCTGACTCGCCAGTTAACTCTGTTGCTGACGTCATCTCTCCTCCCAATTCT TCAAACGCCGTCGTCCCCGCTTCTTCCTCTACCTCCCCCGCCGTTTGCCTTCTCCGCTTCGCCGCAGACTCCGCCGGCGGCGCCTTAATGGGTTCTATCT TCGGCTATGGTCTCTCTCCTCTCTCTCTCTCTCTATATCGTTATCTTTACATACATATGCCCTTGTGAATGTTAAAATTGATGTTAATTAACCCTAATTG TTGTTAACTGAAACATTTGATGTTAGGGAGTATAATTAGTATGCATAGTTTGGTTTATGTTTGATGAATATGATTAAGCTAGGTGGCGGAGAAGGTTTCC GAGTAGTGATAATTTGTTTGATGTAATTTCCTTAGTGAAATTTGGTGAATGATGTGTTTGTTATGTGAGGATTTAATTGTAACATGTTTGAATGGGATAT TTGGTGGTTCTTGTTTTGGATGAGTAGAATTTTGAGTAATTTGATTTAGATTCCGGTCGTAAGAACAATATTGAAGGAGGAAAAGAAATGGAGGGTTATG TTTGTAAAGAATTTCCTCTTTTGAAAACTTTCTGGGTTTTGAGTGAAGGGAGAAAGAAGTTAGTGTAACATCATTTAATTTTTTTATTCATTTAATAATT TTTTAGGAGTATAAGACTCCGCGCAACAGTTTTGTGACCTGGATGTCGTGTTTTGAACTCCTGGAAACAATCTTTTCGCTTGTAAGGGTAGGACTACGTA AACCCCTTCCTCATACCCCACTAGGTGGAATCTCGTGCACTGGTCGTACTTTTTTTATGAAATAATTTCCTGGCAAGTAACTACATAGTTGCATTTCTTG AGCTAATTTTTATCATTTACTTTGATAGATTATATTCATGTATCTAATTTGTCTAAAATGCTGGCAGAGGATTATCCTTCAGAAATTTTAACTTGAGTTA AATAGTAAGCCATTTTTCCTTGTCTTGCTCAAGTGTGCATTTAATGTGTGCTTCAGGTTCTGGATTGTTTAAGAAGAAAGGGTTTAAGGGATCCTTTGCA GAAGCTGGGTCTCATGCAAAGACATTTGCAGTTTTGTCTGGAGTTCATAGTTTGGTTGTATGCATCTTGACGAGACTTAGAGGAAAGAATGATGTTATTA ATGCTGGGGTGGCTGGATGTTGCACTGGTCTTGCTCTAAGTTTTCCAGGTACACCACAAGCTCTTCTGCAGAACTGCCTTACTTTTGGGGCATTTTCTTT AATCGTTGAAGGGCTAAACAAGCCGCAGCCAGCACTTGCACATTCCGTCTTCAGGAAAACAAGTATAGACAACAATGCATGCCCTCCCTTGGCACTTCCC CTTCAACTCCCTCTTCCGGATGAAATGAAAGGAGCCTTCTCCTTTTTTTACGAGTCTCTGAAAAATCGCAGGAAGGGAACTTTTCCTACATCTCATTGAG AAACTCGGCACTTTAGGGGCGGCAAAACATTGTACCGAAGACATGGCTTGCTTACATGCTGACTGAGTTTCAAATGTGATTTCTTTGTTCTGTCATTTTC TTTATCAGTGATTGTTTGAAGGCCAAACCTGTAGTAATGGATTGAGTTTGTTTCATGAACATGTCAACCAAAATGGATTAGTATTAAGTGCAGCAATTCA AGTTAGAAAGATATCCTTCATAAATTTGGGATTTGTTCTGGGAATTCTGCAAATTAAACTAAACATTGTTTCTATAAATTACGAAATTATAGTTAACAAC TAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_172119; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_454054
| Blastp | Mitochondrial import inner membrane translocase subunit TIM22-2 from Arabidopsis with 70.42% of identity |
|---|---|
| Blastx | Mitochondrial import inner membrane translocase subunit TIM22-3 from Arabidopsis with 63.57% of identity |
| Eggnog | mitochondrial import inner membrane translocase, subunit(COG5596) |
| Kegg | Link to kegg annotations (AT4G26670) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442880.1) |
| Pfam | Tim17/Tim22/Tim23/Pmp24 family (PF02466.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |