| Id Trinity | TRINITY_DN49779_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_455402 |
| Sequence | ACGATATTTAATTTTCACCGGAGAGCCGCGGCACCAGAAGGCTGAGTAAACGAACCACCTGACTTTAACTTGAGAGTTACGGTTTCGTAACAACTTTCAC CGTTCCGTTCCATTCCTTTCACTTTTCATCTTCTCTTCACTCTTCTGCCGACACCTTCTTTCCAACTAAGCCTTTAATTGTTTTACCAAAAAAGGCTCAC AGCAAAACAAAACAGAAACGAGTGACATTTATTATAAATTATTCTTTCGTTTTTTTATTCTTTCTCTCTTTCTCTCTCGCTTTAACTCGTCAATGCCGTT CATATGCTTCTGATTTTAGGGTATTCATTTTGATTTTGATGATTTCTAATTATTCGATTTTGATCTTCCATTCACGATTTCCACATGTCTGGACCGCTTG ATCGGTCCGCACGCCCTTGTGAGTATCACTTACTAGTTTTCTTTTTTGCTTTGGATTTTTAATTCTTCAATTTTAATATTTTTTTATCGATTGATTCAAT AATTCAACATATAAGTTCTCTTTTCATTGATGCATTTGTCTTACGCGCCAAATCTGGATCGCTAATTGAGCTAGATTTAGTTGAATGAAACTATACACAG TCTCTTAGATTTAACAAATTAGTAGTAATCTAGGAACCATGTATATCGAAGTAGTTTTGACATTATACATTGATACTGAACAAAATCATAGAATAATTGA AAGACGTATAAGTAGAAATATGTAAAGAGTATTGAAGCATCTGATTCAAATTAGATACTGAAAGACTAATCATTTTGAAGTATCATGCGTCGCTATAATA TTAGTTTAATATATAATCTGCATTTGCTTCAATTCCTGAGATAAAAAAATTGCTTTAAGAGTAATTGTGTTTGTATCTGAAAAGGGCAGTGTGTTAAAAT GGAACTTTGTTTATTCTTCTTAGGCCTTGAAGGGTTATCTGGTAATGAAGATAAAAAAGAGCGGAAATCGGATTTTGAGAATTCAGAGGACGATCGGAAG ACACGTATTGGCAGCCTGAAAAAGAAAGCAATCAATGCATCCAGCAAATTCAGGCATTCTCTCAGGAAGAAAAGCAGCAGGAAAAAGAGTGCAAATCGAG GCAACTCTGTCTCCATTGAGGACATTCGAGATGTTAAGGAGCTCCAAGCAGTGGATGCATTTCGGCAGGCACTTATGTTGGATAATTTGTTGTCGGCAAG ACATGATGACTATCATATGTTATTGAGATTCTTGAATGCACGGAAACTTGATATTGAGAAAGCAAAGCAAATGTGGGCCAACATGATTCAATGGAGGAAA GAGTATGGTACTGATACAATTATGGAGGTGAGCCATTTGATTCTATGAAGTTTAGTCAGTGGCACAGACACAGGGGTTACCAAATTCCAAAAATTGTAGG ACACACCATTGCATTTAAATGTATATAAATTTGAAAATTTTAGAAAAAACATTCATAATATTGTAGCCGTGTTGTTTTGAAGCTGAAAAAAAGAATTTTT AATCATTGACTGTGTCATACAAGCATCTGTTTCTAAAGTTTATCCTACACGTGACATGACGCCAAAATGGTGTATCCACTCTTTATAGTTTGATTCAAGA ATTATGCCAACCTTTTATTTGATTTTATTCTTTGGTTGGTCATGTTTGATTTGATCATCTGTACATTTTAGTTTCCTGAATTTGATGTTGATACTATATT ACTTTGGTTTCGTCTCTTTGCTGCTAGGATTTTGAATTCAGTGAGTTGAATGATGTTCTGGAGTATTATCCACATGGTTATCATGGAGTGGATAAGGAAG GAAAACCTATTTATATTGAGAGGTTAGGTAAAGTTGACCCTAATAAGCTTATGCAAGTAACTACCATGGATAGGTATTTAAGATACCATGTGCAGGGTTT TGAGAAAACATTTGCTATTAAGTTTCCTGCATGTTCTATTGCTGCAAAGAGGCATATAGATTCAAGTACCACCATTTTGGATGTTCAAGGCGTGGGTTTC AAAAACTTTACCAAGTCTGCACGGGAACTCATCATGCGGCTGCAGAAGATTGATGGTGACTATTACCCTGAAACATTATGCCGAATGTTTATAATCAATG CTGGTCCTGGTTTTAAGCTGCTCTGGAACACAGTGAGGACATTTCTTGACCCCAAAACTACTTCCAAAATAAATGTTCTTGGAAACAAATTCCAGAGTAA ATTACTTGAGATTATCGATGCGAGCGAGCTACCAGAATTTCTAGGTGGTACTTGCACTTGTATAGATCAAGGTGGTTGTATGAGGTCTGATAAAGGACCT TGGCAAGACTCAACCATTTTGAAGATGGTTATTAGTGGTGAAGCAAAGTGTTCCAGACAAATAGTAACAGTTTCTAACGAGGAGGGGACAGTTGTCGAAT GTGATAAGACAAGTTATTCAATGATAAGTAGTGATACTTCTACAGCAGAATCAGGATCTGAAGTTGAAGATATCACTTCTCCCAAAGCAAACGGGAATTA TATAAACCCTCGGTTGACTCCTGTCCATGAAGAAAGAAGATTGGTTCATAAGGCTAGCCAAGCTGGTAATTTCTCTGAGCATGTTCCAATGGTTGACAAG CCTGTCGATGATGCATGGAAGGAGAATCAATTGGCATCTTTTAAGTCATCTGGAGCCACAGAAAAAATACTATTGACTAATGGAAGATCCGCTGGTGGTC GTTGTGCAAATATCAGCGCTATTATAGTGGGCTTTTTTTTTGCCATCTTTAAAATTGTTAGTTCAGCAGTATTTCGTGTCACTAAGAGAGTAAGAGACTC TGAATCTGATGCTCCCCAAAATATGCCTAGCATAAGTGCTGATTCAACACACATGGACTCTCATCCCCCTTCTGGAGCAACAAAGGTTGAACTTGCCTCA TCTGATTTGAAACGCATTGGTGAGCTTGAAGAGAAGATTGACATGCTCCACTCGAAACCTAATGTGATGCCATCTGAGAAAGAAGAGCTGCTGAATGCTG CGGTTTATCGGGTGGATGCATTGGAAGCTGAACTAATTGGCACTAAGAAGGCTTTATATGAAGCTTTGATAAGACAAGAAGAACTTCTGGAATACGTTGA CAGATGGGAAATAAGCAATTCAAAGGTAAATCGGAAATACTTTCGTCATGTGTAGGATTTAAAAGATAAAATTCAAATGCTTGTTACTGCCTATCATCAT GGTGACTCTTAAAAAGTATGTCCAATCTGTTTGTAAAGCAGAAAAGTAAGAAGTTTTTCTGTTGAGGAGTTAGATTTACATTGAGGAGCTTGTTCGCTGC ATTGGTGGATTTTCCTTCTTTTTTGCTTGTATACAATAAGGTGCCCAGGAGTTTCTCTTCCTAGTTTGTTTGTTTATTGTCGGAATAAAATTCACCTATT ATGGAATTTATATTTATTTATATAAATTGCTATTTATCAACTCTCCCTGAAAAGTTTGTTATGATGAGTTTGACTGTTGAATTGTAAGTATTCATTGTAT GACATTTATGAAATTCAGACAGTTTATTTTTTGATCAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_172120; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_455402
| Blastp | Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 from Arabidopsis with 56.74% of identity |
|---|---|
| Blastx | Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 from Arabidopsis with 58.39% of identity |
| Eggnog | Transfer protein(ENOG410XRSQ) |
| Kegg | Link to kegg annotations (AT2G21520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458735.1) |
| Pfam | CRAL/TRIO domain (PF00650.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |