| Id Trinity | TRINITY_DN49782_c2_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_454272 |
| Sequence | GTGAGTTATACGAACCCAATATAAAACCCCAACACCGCTCTTTCTCTATTCAATGTAACATTCTCCTCTTCTCCATCACTCACATAATTACTAGATGAAT AGTGAAATCCCTAAAGCAGAAGAAATGGATGGTTCATTTGAAGATGAAGATGATTCACCTGCTGTTACAATCGGCGAGTACCTTGATGAAGTTGAGGAGC GAGAGCTGGCAGCTGATTTAGTTCTGGGCGGTGATGATGGCAAGGAATGTACCTATAGCAAAGGATATATGAAAAGACAGGCAATTTTCTCCTGCCTCAC CTGCACCCCAGATGGCAATGCTGGAGTTTGCACAGCTTGCTCATTGTCTTGCCATGATGGCCACCAGATCGTGGAACTATGGACAAAAAGAAACTTCAGG TGTGATTGTGGCAATTCAAAGTTTGGTGACTTCTACTGCAAGATTTTCGCAGGCAAAGATGCAGAGAATGTTGAGAACTTGTACAATCATAACTTTAAAG GTTTGTATTGCACTTGTGGTCGCCCCTATCCAGACCCAGATGCTGTAGAACAAGGAGAGATGATACAGTGCTGTCTATGTGAGGACTGGTTCCATGAGGA GCATCTTGGTCTTGAGCTTTCGGATGAGTTTCCCAGAGATGATGAAGGAGAGCCTCTGTATGAGGATTTCATCTGTAAGGCATGCTCTGAGGTGTGTTTC TTTCTAAAATTATATCCTGGAGTGGTACGGGCTTCCGGAAAGCAGCCAGATGCTACCGTCGAAGTTAGCAAGGGTAAAGGTGTTCTGGAAGCTATGCCTC CAATGAGTGATGCCTTTTCACACAGTTCTCCTAAAATTGATGATGCAAAAGCAACTATTTCTGATGGTAAGGAGCTGCTTCAGGGAGAAAATTGTGACAA CAGTAAGGTTTTAAGCCAGTGCACAAGCAGCACCAATATTCGCTGTCTCCTTGGTGTTAACATTGTTTCTGCCTCCCCAGTTTTAGATGGTAAACCAATA TTCCTTTCCAAAAATTGGAGAGATGCTCTATGCAAATGCAGCAATTGTTTGGAGTTTTACAACCAGAAGCGAATTGCTTTTCTACTTGACAAGGAAGACT CAATTGTGGAATATGAGAAAATGGCCAAGCAGAAGAGAGAAGAAAAGTTGCAGGAAGCAGAGGGTGCTGAGGTAAACTTCTTTAATAATCTTGGGCACGT AGAGAAAGTGGAGATCTTGAATGGCATTGAAGAGATGAAGGACGGGTTTCGTACTTTCCTGGAATCTGCAGACTCATCAAAGCCAATTACTGAGGCTGAT GTCCACCAATTTTTTGAAGAAATTAAGAAAAAGCGTCGCCGCATACAGTGAGTTTTTCTTGTCTTGCCAATTTAAGGGCATTGCTCCAAGCTTAAGTGTT TATACTTCATCTGTAGTATCTGATTTTCACAAGCCCTGGATGCTTTATGATATTTAAAATTACAATGCTTTGCTTGTTAACTGTTTCTTTACTATGTAGA CTTTGTATTTTGGTTGGCTTTGATCATGACCTAAATGCATAGGACATATGTTGAATGAACAACAACAACATCTGCATGGTATTTACATTTACAAACATAT GTCCCTATGCATGTGACATATGTTATGTTGTGTGCAGCATCTTGCATGCTAGATGACTTGAAGAATGAGCTTGTCTCTTTCCGTCTCTATCCCCGATAAA TATATATTAAGTAATATAACTTTGTTTTTATATTTTTCTATTTGATTGAATGATGCATTTTAATTGGTCTGTCAGACATGGTGGCATGGTCTGGGATATC ATATCTCCAAGCAAACGGAATAGTAGATAATATCATGTATAGAATATTTCTATTGATAGACAATAGGATTAAGATTTAACATGTATGCACTGATAGTGTA AGTGTTTTTTACATTGTCAGCAAATCATCACCATTGATTTGTTATCCATTATTGACTCTCAAATAAAAGTAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_172158; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_454272
| Blastp | Putative E3 ubiquitin-protein ligase UBR7 from Homo with 34.43% of identity |
|---|---|
| Blastx | Putative E3 ubiquitin-protein ligase UBR7 from Homo with 34.43% of identity |
| Eggnog | ubiquitin protein ligase E3 component n-recognin 7(ENOG410XSV6) |
| Kegg | Link to kegg annotations (55148) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424427.1) |
| Pfam | Putative zinc finger in N-recognin (UBR box) (PF02207.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |