Ll_transcript_454039

• Id Trinity: TRINITY_DN49787_c0_g1_i12
• Name Transcript: Ll_transcript_454039
• Sequence: ATATTTTGCTTCCTTTTGCATTTCCTTTTGTTAATCTTGCTGTGTTCATAGGTGGGTTCTTTGTATTTTTTACTGTCTGTGTTGCTTATTTAAGGTTTGA GTAGATGTTTTCAAGCTGTTACATGCTTAATGCATTTGTGGGTTTTTGATACGGGTAGTCTTAGGTACACTAGCAGATCGCACTGGCACCACATAAATGT TTGATGTGGCAAAACATCACGAGGAAAGATTGTTGGAGTTATTATTAAGTGAAGTTGATGAGACTTATGTGTTGCAGCACCTCTGCATCGTAAGATTTAT GCTCTGCTATCTAGAACAAACTTTGTTTCTCCTTGGCAAGAGATTAGCTTATATATCGTAGCCAATGACACAATTTACGGTGTGATCGTGACGCTCATTT AATAAATGTCATAGGCTAACCAAAGTCATTCTCAACATTGCTAAATTAGTAGCAAACTCTATGCTGCTAAAGATCTTAGGTTTTTAAATAGCTTCTTGCT CCATCAGTTCCTGTAATGAATTAACACAAAATCTTCCTTTATATTATTATTAACTTTGTTATTCTCCCTTTTTAATCTTTCAATATATTGTCAAATGTTC AATTTACTTGGCTGGTGTCTCTCCTGATTTTCTCATACTGATTTACTTCAATGTTTGTAATGCCCGGGCCTCTGGTCCAGGTTGATCAAGAAATGTAAGC AGTTATGAAAATAATACTTGTAGGGTAGAATAAGGATGTTTGGAGGACACTAAGAGAAGTGATGTTCTTCTAAATATGTAACCCTTGTTGAAGGGAAATA GCTGCTGACTGAATATGGTTATATTGGGAGATAAGCTTTGATGACGGAGTTTGAGGAGTTTCTAGTTAGGGTAGGGTGCATTCAAAGTTTATTCTGCAGC AGAAAGCTAGTTTGTTCACTGGCACTGTCTGAGGTAATCAGAGGCTCTGATTTTGCAAACAGCCTCTGGGATTTGTGGGTGGAGGTTTCTCTTTTCCTAT TTCTATTTTTCTCTTGATTTACTTCTACTCTCTTCTATGTTCTTTTTTCTTTCTTTGATGTCTCTGTTTGGATGTTATATTTTGGTCCACATATTAAGTT ACATTTTGTAATATTTAAATTTGAAACACTCTTCCTTTGATTGTGAAAAAGAAAATGCACTGGGTTACTTTAATTTCTTATTATTTCTGATACTCATGCT GTAACAGTTGATGGATATCAATGAAAGTCCGGTTTATCTTCTTCTCAACCCTTCAATCAATCATTCTCAAAAGGATCTCCCAGTCAGTATTTTCGAAAGT GGTATGTAATCTCCATGATTATGTCAACTGGTTTGTCATCATTCTTTCAACCGTTGCTCAGGTGAAGGAGCATCCTCGTGCAATGGGATCTTAAACATTA GTTATAGAGTAGTTTGGGGGGAGGCAGAGATTTTAATATACCCATTCAGTAACAGGGAAATCGGTTCAGATGTTCAGTTAATTGTACTGCATTTTTATTC TTATTTTCACTAAAGATATACCTATTTTGGCACAGAACTAATATTTTGTCCTGCATAAGTATATCATTTCTAATAAGTTTTCTAATGCAATAATCTTTTT TGGCCTGCATATTTGGGTGGCTTGTGAAATGTATTTACAATAAGCAAACTGATAAATATAACTTCGAGCATAGCTCATACTTCCTAATATAGCTTATACT TCCTGTACTGCTTTGCCCCTGAAGTCCTGGACCATAAGTTGTTGACACTAGCATCTTGCTACATAGTAGAATCATATTTTTTTTTTAATCTGTATCAAGA CTTCTGTTATAGACTAAATAGCCAACTGCATTTCAACTTTCTGGCTTTCTACTTTTTCAAAAAATAAGAATCATGTATTCTTGTTTTTTCTTTGTTGGTC AATTTTGTTGTTGTATTTTTGCCTTCTTATTATGTGTTATTGCTGTTGCTTGCTATTGCATCTACAGAACTGCATGTCATAGATGGGATTCCACAACTTA TCTTTGTTCGCTCAAGTTATACTATTGAGACTGTTGAAGCAGAACGGATC
• Tissue: pods
• Gene name: LI_gene_172216;
• Additional information: -

Expression of Ll_transcript_454039

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.1
• PS3: 0
• PW1: 0.1
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454039

• Blastp: -
• Blastx: COP9 signalosome complex subunit 6a from Arabidopsis with 78.79% of identity
• Eggnog: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG1310)
• Kegg: Link to kegg annotations (AT5G56280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003522838.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;