Ll_transcript_454040

• Id Trinity: TRINITY_DN49787_c0_g1_i13
• Name Transcript: Ll_transcript_454040
• Sequence: ATTAATAACACGATTCAATATTAAACCTAAAGAATATTCATGTTAGCCTTCTTCGTATTACTCGGATTAATTCGTCTCTCCCCTAATTCAAACCATGTAT GTATGGAAGCCTCAACCGATGACGTAAGAACAAGGTGTTTTGACCCCATAGTATCTTCCACCATGTTCAAATTCTGAAAACCAGAAGAAGAAACCCTAAT CACGATTCATCACTCCAATTAAACTCTAAACCAATCACTTCACCGCAATCATCGAATCGATTCAACAATGTCTTCATCATCGAGCAGCGGTTTAACATTC AAGCTTCACCCTCTGGTTATCCTCAACATCTCAGACCATTACACTAGGGTCAAGTCTCAGATGAACCCTCCAATATCACCTCACAACGCTACCACCACCA ATGGCGGCGACGCTGTCTGTTCTTCTACTCCGCCGCGGGTCTATGGCTGCGTTATAGGGGTTCAGAAGGGTCGAACCGTTGAGATCTTCAATAGCTTTGA GCTTCTCTATGATTCTTCCAACAATTCCCTTGATCGTCCGTTTCTTGAGAAGAAGCAAGAGCTCTGTTCAGTATTCCTTTTCTCTTTCCGCTATCTGTTT GATAGAGTTTTCATTTTTATGCAATTTTCAATTTTTGAGTTCTTTTGCTTGAGATAGTGGAGAGACCAAGAGAAATTATGATACTGTAGGCGAAATGATG TGAGTGATTTAGATTTTATTATTGGTTTGTCTAAAGATGAGTTGCATATGAAATTATGACATTGTTTATCCGTGTAGCCGACCGCAAATAATGGGGGAAA TGCTTGGCTGTTGTTTGGATTTTGATTACTTAGCTATTTCTTTAGGGCTTTGAGAAAGGCCTTGATGTAACAACAGTGCCATTTGAGTTTTTGTTTTGTT GCGAAGTTGATTTTTCAACTTTGGTTGATTAAGTTGAACATATTTTACCCATTCCTTTTGGTTCGAGCAGCAATGAGCTTGATTACCCTTAATCAAGTCT TGGTTTCAAGCCTTGTGAATAGAACTAATAAGCACTAGGAGGATATACACACACACACATATTTGGTTTCCTAGAGTATCTCCCACCCAATATGTGAAGA CTAAGTTCTTGGGGTATGGTCAGGCTCTCAAGTGATGACCTCTCCCAGTAATATTTTTACATAGACATGAATCTAGAGAACGAATCCAAGCACTGGAAGG ATTAGTTGGAGTGCAAAGTGAATTTTGCATACTTAGTCTTAGACAAAAATAGACATGTTTTCTCTCTCTGAGATGTTTATTTTTCCCTTTAAATTTTAGT ATCAGTTTTTATTCAAAGTTGTTTTTTTTCAGATAAGAAGGTTTTCCCACACTTCTACATACTGGGATGGTATTCGACTGGGAGTGATGCAGAAGAACCA GATATGCTCATTCACAAAGCTCTAATGGATATCAATGAAAGTCCAGTTTATCTTCTTCTCAATCCTTCAATCAATCATTCTCAGAAGGATCTCCCAGTCA GTATTTTCGAAAGCGAACTGCATGTAATAGATGGGATTCCACAACTTATCTTTGTTCGCTCAAGTTATACTATTGAGACTGTTGAAGCAGAACGGATCTC TGTTGATCATGTTGCACATCTTAAGCCATCTGATGGTGGTTCGGCTGCTACACAATTGGCTGCTCACCTTACTGGTATACACAGTGCTATCAAAATGCTT CATAGTAGAATTAAGGTGTTACATCATTATCTTCTTGCAATGCAAAAAGGTGATGTTCCTTGTGAGAATTCACTATTAAGACAAGTGTCAAGTCTCCTGA GAAGATTGCCTGCTATTGAATCTGGAAAATTTCAAGATGATTTCTTAATGGAATACAATGACACCTTATTGATTAGTTACCTTGCCATGCTGACCAACTG CTCAAGTGCTACAAATGATCTGGTGGACAAATTCAATACTGCATATGATAGGCATAGCAGAAGGGGTGGACGAACTGCTTTTATGTGAAAGCTGTTTGGT TGCTCATTACTTTTTGTCTTGCAGCCTCAAACCACTTTTCCTTTAGGCATAGCTTTTTTTGCATTGGATTTGAAGAGAGAGAAATGAATAGAAAGAAAGT AAAAATGTAGAAAAGGATGACCCCTCCAACCAAAAAAAAAGTATATATTTTTTCTGCATTTCTAGTAAAAAATCGTTTGCCAAGTTGTTGAGATAAAAGG GTTCAAGACATATTGTGAATTTCCATTATGAATATTTGTTGAGTTACCATCCCATC
• Tissue: pods
• Gene name: LI_gene_172216;
• Additional information: details;

Expression of Ll_transcript_454040

FPKM

• PAB: 0.6
• PNAB: 1.2
• PS1: 0.6
• PS2: 0.9
• PS3: 0.7
• PW1: 0.6
• PW2: 0.9
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454040

• Blastp: COP9 signalosome complex subunit 6a from Arabidopsis with 83.51% of identity
• Blastx: COP9 signalosome complex subunit 6a from Arabidopsis with 84.33% of identity
• Eggnog: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG1310)
• Kegg: Link to kegg annotations (AT5G56280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419995.1)
• Pfam: Maintenance of mitochondrial structure and function (PF13012.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;