Ll_transcript_454026

• Id Trinity: TRINITY_DN49787_c0_g1_i3
• Name Transcript: Ll_transcript_454026
• Sequence: GTTTGGCTCTCAAAAGAGGTGATAATATGTTGAAATTCCTCATTTTAGCCATCAAGAATGGAATCAATGTGTTCTGCTTGTGAAACTGTGCTGCTAGATG ATATGAGGAGATCCACAAGGGTTTTGATACACATGAAGTAATCCATAGTTGAGCTAGAACCTTGTGTGATAGATCCTAATTGAGAACGAATGTGACGATC CATGGATTTGGTATGGGAGGGGCAGAAAGCATAAACTTCTTGCTATAACTGCCAAGAGTTATAACAACCAACAACATGTGGTTGTAGGCCTTTAGAAAAC GAGTTCAGGAGTCAAGAAAAAATGGCTTGGTCCTGTTCCTCCCGTAGTAGATAGGCTGGGTTAATCTGATTGATTAATCTATCATCCTCAGATATAGAAA TCTAAATGAAATTTCAGTACCTTTACGAACTTTGAGGTTTGATTTGAGATGATAATCACATTCATGAAGTGTTGCCACACCAAAAAATTAGTATCGATCA TTTTCATTGACGGCATTGGAAGCTTGAGCTGCACTGGCACAGTGTGAAGTGGTACAACACTGGAGAATAGCGGTACTGAAGTCATATGAGGCGGTGGTGA TGCCATATGGGGCGTTGTTCCAGCAGGATCAGTGTTTGTGGCCTTAACCATTGCTCTCTGATACCATTTGAGAAGTTAGAAAACAAAGGAAAATACAATG GAAACCGGAAAGAAAGAGAAATAGAGAAAGGGGGAGAGAAAGGTAACTGCTCTGTAACTGTTTTGTTTTCTATTATTAGAAGTAAATGATATAGTTACAA CTGAGAGCTATTTATAGGAATAGCTTGAACTCTATATTCATAACTGCTCTGTTAGTAGTTTAATTGCACAACTGTCATATGTTTTGACAGCTTGGACAAT TTGTCTATGTCTACAACCATAAACTCTATCCTACTACATAGTATTTATCTCCAGTAAGTGGAAGGATAAAACTGAGAGTGGATAGGTGTAGACCAAGTGG CAGGACCCAAAATTGAACCATGTTAACTGCATGAGTATGATGCATGAGGTGGGACAGCCCCATATAGGATGGATGGGAATGAGTGGAGTGTGGAGGAAAG CCAGGAATATTGTATTGTGAAGATTGAGGAACAAACCCAACCCAACAGGACTGGGACTAGGTCTGGTAGAAGAAGCTAAAACCTGTTGGGACCCCATGAC AAGCTCAATAGATGCCAGCATTGCAGTATCTCATGTCCTGGCTTGTTGGACTTCATCAGTTTTTGTACTCATACTCGATCAATTAAATTAAACCATTTTA TTTTCCTTAGTTTCTATCCTTTGGGAAGGGATGGAGTATTTTCTCTCTTCATTTGTTGGCTTTAAAATGGGTTGTAGTGAAAGCCCATGAAACAATAGTG GATGTAGATGATGGTAGGGTGGGTGAGGTTATGGGAATACATTTGGTGTGCTGATGGGCCTCGATATGGTTTCCTGGTCTGTAGTAGCTGGACAAAAATG CTTTGGTGGTTGGTATTAGTTCATTAGTTAATGGGAAATGTTTTGGAATGTGAGATTGTTTAGAACTCTTGGAATATGAGCTGCTCTGACTCAATGGGTA CCTAAATTTTTCGTTCAGGAATCATAAGCAGTATTACATAGATGACAATATGTTGGAAGATGGAGAAAATAATTACGAGGGTCAAATGCTTATTACAGCT GCATACCATGTGTCGACCCTTTCCCTTCAGAACATTTATGTGTTGGGAGTTTCACCAGAACTATGGCTGTTGTCAGTTGGTACAGGTTATATATAGAGGA TGGAGTAATAATTGAATGTGTGCTTACTCATTTTCCAGGATACTGTCTTTCGCATGTCTCTTTGACACCTGTTATTCCTTGTTTCTGTAAGTTGCATTTA AAGAAATTAAGAGCTTAATTTATGCAATTGCAACTTTTGATTTTTCTTCTGTTATGCATTCTTAAGTTTTGCTATTTTGTTCCATGGTCTGTTAGACAAC GGACTTTAATAAAAACTATCATTACAAAGTACTGTTAGCATTTTGAATCTTATTAACTTTTCTGTGCTAGTTTTTATTTTTTATACAATTTGACGTCATT TTCTGGTTTATATTTAGGTTCTCATATTAAGTTAGATTTTTGTACTTTTTTAAAATTGAAACTCTCTTCCTTTGGCTATGAAGATTAGGTTACTTTAATT TGTGATTATTTCTGATACTCATGCTATAACAGCTAATGGATATCAATGAAAGTCCAGTTTATCTTCTTCTCAATCCTTCAATCAATCATTCTCAGAAGGA TCTCCCAGTCAGTATTTTCGAAAGCGGTATGTAATCTCCATGATTGTATCATCTAGTATGTCATCATTCTTTCAACCTGTTGTTGCTCAGGTGCAGGATC TTTAATATACCTATACAGTATCAAGGAAATGGGTTCAGTTAATTGTACTTCATTTTTATTCTTTTTTCACTGAAGTTGTACCTATTTTGGTACAGAATTA ATATTTTGTCCTGCATAACGTAAATCCTTTCTAATTAGTTTTATAATGCTATATTCTATTTTGACCTACATACTTGGGTGGCTTGTGAAATGTATTTACA ATAAGCAAATTATGTTTGATAAATATGATTACTGACATTAAATTGATCACAGCTAATAAACACAGCATAGTTTCTTCAATATGGTGGTCATGACATCCTA ATATAGCTCATACTTCCTGCAGTGCTTCCCCCTGAATTATTGTTTTTTATTTGTATCAAGACATTTGTGTCAGACTAAATAGTCATGCATTCCAACTTTC AGCTTTCTGCTTTTCAAAAATAAAAATCCTGTATTGTTTTTTTCTTCATTTTTAGTCAAATTTTTATTATCTTTTTGCCTGCCTCTTGTGCTGAGCCAAT GAATTATGTGTTATTGCTGTTCCTGGCTATTGCATTACAGAACTGCATGTAATAGATGGGATTCCACAACTTATCTTTGTTCGCTCAAGTTATACTATTG AGGTTGGCTTTTTATGACTCTACTTTTAACTCGTTTCACATTCTAAACCATTGTTCTTCAATAAATGATTGACTTGGCACCCTCTTCCCTCTCTTTTTCC TTGCTCCGTTGAAGACTGTTGAAGCAGAACGGATCTCTGTTGATCACGTTGCTCATCTTAAGCCATCTGATGGTGGTTCGGCTGCTACACAATTGGCTGC TCACCTTACTGGTATACACAGTGCTATCAAAATGCTTCATAGTAGAATTAAGGTGTTACATCACTATCTTGTTGCAATGCAAAAAGGTGATGTTCCTTGT GAGAATTCACTATTAAGACAAGTGTCAAGTCTCCTGAGAAGATTGCCTGCTATTGAATCTGGAAAATTTCAAGATGATTTCTTAATGGAATACAATGACA CCTTATTGATTAGTTACCTTGCCATGCTGACCAACTGCTCAAGTGCTACAAATGATCTGGTGGACAAATTCAATACTGCATATGATAGGCATAGCAGAAG GGGTGGACGAACTGCTTTTATGTGAAAGCTGTTTGGTTGCTCATTACTTTTTGTCTTGCAGCCTCAAACCACTTTTCCTTTAGGCATAGCTTTTTTTGCA TTGGATTTGAAGAGAGAGAAATGAATAGAAAGAAAGTAAAAATGTAGAAAAGGATGACCCCTCCAACCAAAAAAAAGTATATATTTTTTCTGCATTTCTA GTAAAAAATCGTTTGCCAAGTTGTTGAGATAAAAGGGTTCAAGACATATTGTGAATTTCCATTATGAATATTTGTTGAGTTACCATCCCATCCTAGTGTT TATTTGGTAGCGACACTTGTTGAGAGCGGTAACCATGAACTTTGAAAGTTGTTAGTTTCTCATCAAAATCAAATTTATTTATTTTTCTATTCAATCCCAA C
• Tissue: pods
• Gene name: LI_gene_172216;
• Additional information: -

Expression of Ll_transcript_454026

FPKM

• PAB: 0.6
• PNAB: 0.8
• PS1: 0.2
• PS2: 0.4
• PS3: 0.6
• PW1: 0.4
• PW2: 0.7
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_454026

• Blastp: -
• Blastx: COP9 signalosome complex subunit 6b from Arabidopsis with 81.88% of identity
• Eggnog: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG1310)
• Kegg: Link to kegg annotations (AT4G26430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419995.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;