| Id Trinity | TRINITY_DN49793_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_455845 |
| Sequence | GGCATAGCATCTCCGAAAGGAGAACACATCTTCTATTCTAAAACCCTCTCTATTGACCCAAGTCCAACATCACCCGATTTGTGTGTTATCCTCGTCAAAA CTAAAACCCTAATCCCTTGCCTGATGTAATAATTGAATGGAAATCACTTTCTAAGGCCTAGCTCAGAACGCCGAAATCCTAACGAACTCTGAAACCCAAG ACCATGAACAGCCATGTCCACGAGAAAGGTTAGAGAACCAAAGGAGGAAACTGTCACTCTTGGCCCATCTGTTAGAGAAGGAGAACATGTTTTTGGTGTT GCTCGTATCTTTGCATCATTTAATGACACTTTCATTCACGTGACTGATTTGTCTGGGAGGGAAACACTTGTTCGCATCACCGGTAATTGTTTCGCTTAAC ATTGTGTTGGTACCCCGGAAGTACTGTTTCAAAATTGTAATTTGTTGGTTTTATTTATGCTTGATATGTTTTTGTACGGTTCTTATATAGTTAAATGTAT TTTAGCTTTTAACCCTTTGATTTTATGCCCAATAATGTATGTTGTTTATCGGAATGTAATGTTTGAGCTGGGAGACTCTGGTTTTGTTAAACTGTTTCAG CTTTCAATACTTTTCGTAACTGTTTATTCTGAAAATTGAAAAATAGTGCCATTCACTACATTATTTATTTTACTCTATCTTATTACTTTGGTTTTCTGAA TTTACGAAATTTTACTATTCTAAAATTATCTATTACTCTTGCAAATGAAGACTTACTGTTATTAACTAATTTTTTTATTTTACTTTAGCTTTATTATTTA AGAACATTGGTTATGTCTCTGATTTTTAATCAGTTGATAAATATATCGTGTTAAGGTGTTCTCTTTTGTAATTTGCTTCTAATTTTCAGGTGGAATGAAG GTTAAGGCTGACAGAGATGAATCATCTCCATATGCTGCTATGCTTGCTGCACAAGATGTTGCTACCAGATGCAAGGAGCTTGGCATTACTGCTCTTCACA TCAAGCTCCGTGCCACTGGTGGAAACAAAACTAAAACTCCAGGTCCCGGTGCTCAGTCTGCTCTCCGTGCCTTGGCTCGTTCAGGAATGAAAATCGGCCG CATAGGTATCTGCCATTCTATTGTTTGCCTTCTCAATTCCTGGTTAATTTTGTGTAGTTTGGTATCATTAAATGGCATATGTTATTTACTCATATCTATG TTATTTTATTTTCAGAGGATGTGACTCCAATTCCATCCGACAGCACCCGTAGAAAGAGTGGTAGAAGGGGTAGAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_172260; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_455845
| Blastp | 40S ribosomal protein S14 from Zea with 98.57% of identity |
|---|---|
| Blastx | 40S ribosomal protein S14 from Lupinus with 97.26% of identity |
| Eggnog | Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (By similarity)(COG0100) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431827.1) |
| Pfam | Ribosomal protein S11 (PF00411.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |