| Id Trinity | TRINITY_DN49794_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_453498 |
| Sequence | GCATAACGTAATTTCCTTCTTTTTCTCCGTCCAATATGGTATTAAAATGGTCATTCAAAACAAAGATTGAAAATTTCCAAGATATGTCAAGCATTTACAT CCACCCATAAATGTATATCGCCAACTAAAAATTGATTAGGACGAGAAACAGGTTATGTTCAGAATCAAAATGCGTTAATTGACAACAAGACAAGTAATAT CCAAAACTAAAACATTATATACATATATACATCGCTGAGTTAAATAAAATAATAATCAATTGTTTTAGGCTATCTTCATTCCCAAAGCATTTCTCTGAGC TGAAATCATGGCAGTCGAAAGGTCTGGAATCGCCAAAGACGTTACAGAATTGATTGGCAAAACCCCATTAGTATATCTCAACAAAATCGCAGAGGGTTCA GTTGCTAGAGTTGCTGCCAAACTGGAATTGATGGAGCCATGCTCCAGTGTAAAAGACAGGATTGGTTATAGTATGATTGCTGATGCAGAGGAGAAGGGGG TTATCACACCTGGTCAGAGTGTTCTCATTGAACCAACAAGTGGTAACACTGGCATTGGATTAGCCTTCCTGGCAGCAGCAAAGGGTTACAAACTTATAAT TACAATGCCGGCTTCAATGAGTCTCGAAAGGAGAACCATTCTTTTATCTTTTGGAGCTGAGTTGGTTCTGACAGATCCTGCAAAGGGAATGAAAGGTGCA GTTCAGAAAGCGGAAGAGATATTGGCTAAGACTCCCAATGCCTACATGCTTCAGCAATTTGAAAACCCTGCCAATCCCAAGGTACACTATGAAACCACAG GCCCAGAGATATGGAAAGGCACTGATGGGAAAATTGATGCACTTGTTAGTGGGATAGGTACTGGTGGAACTATAACAGGTGCTGGAAAATTTCTGAAAGA GCAGAACCCCAACATAAAGCTGTATGGTGTGGAACCAGTTGAAAGTCCAGTGCTCTCTGGAGGAAAGCCTGGTCCGCACAAGATTCAAGGGATTGGTGCT GGATTCATTCCTGGAGTATTGGACGTTAATCTTCTTGATGAAGTGGTTCAAATATCAAGTACTGAAGCTATAGAAACTGCAAAGCAGCTTGCGCTTAACG AAGGTCTATTTGTTGGGATATCATCTGGAGCTGCAGCTGCAGCTGCCATTAAAATAGCCAAAAGACCAGAAAATGCTGGAAAGCTTATTGTAGCTGTTTT CCCAAGCTTTGGTGAGAGGTACCTGTCCTCTGTGCTGTTTGAGTCGGTCAGAAAGGAAGCTGAGAGCCTCACATTTGAACCCTGAATTCCACCTTAATAA TGATTTCAAGTGCTGTGTTCCATCCTTGCAATTCTGAAATAAATAAAAGACTAGTTCAAAAGAAAAGAGAAAAAATATTAGTTATGCAGAAGACTCCTGA AATTATAGGAAATACACTGTTTAGTAATGGAACATTGATGTGATATCATTATTTTGGTATTTCTTTAAGTTATGATCTGAAAAGGCTTGAAAGGATTGTT TGTGATACCATATACATACACACACGCGACAAATAAATATAATTCCACTCGCTTGTCACCAATAAAGAAAGATCTTGTGAGTAATTTATAAGAAAATGTG ACACACGATGACATGATTTTCATCCTGAGAAGAGTTAAGGTTACATTATACGTAAACTCCTTCTGCCCCTTGATTGTTGTGTTATTAAGTAAAGGAGTTA TGACTGAGCTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_172265; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_453498
| Blastp | Cysteine synthase from Citrullus with 85.54% of identity |
|---|---|
| Blastx | Cysteine synthase from Citrullus with 85.54% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (BAA05965) |
| CantataDB | Link to cantataDB annotations (CNT0001535) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427530.1) |
| Pfam | Pyridoxal-phosphate dependent enzyme (PF00291.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |